CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CFIO01_05363
(
Colletotrichum fioriniae
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CFIO01_05363
T192218_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sre
M01237_2.00
Neurospora crassa
NHGATHWN
NWDATCDN
PBM
Lambert et al.(2019)
pTH11832
0.854
0.928
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXF76281
GATA
123
156
CSNCGTTRTPLWRRSPQGTTICNACGLYQKARNA
EXF76281
GATA
295
329
CQNCGTTITPLWRRDESGHTICNACGLYYKLHGVH
Links
Other
GATA
family TFs
Other
Colletotrichum fioriniae
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy