CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gtaI
(
Dictyostelium discoideum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
DDB_G0281661
T192478_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaI
M02012_2.00
Dictyostelium discoideum
VMGATCKV
BMGATCKB
PBM
Weirauch et al.(2014)
pTH5406
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaN
M02014_2.00
Dictyostelium discoideum
NNMGATNNN
NNNATCKNN
PBM
Weirauch et al.(2014)
pTH5355
0.810
0.771
For this family, TFs with SR scores >
0.802
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02012_2.00
GATA
49
83
CRHCGTTDTPEWRRGPDGRKSLCNACGLHYSKLVK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0216329
GATA
479
513
CRHCGTTDTPEWRRGPDGRKSLCNACGLHYSKLVK
Links
Other
GATA
family TFs
Other
Dictyostelium discoideum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1Plus.C_1210006
Dictyostelium purpureum
estExt_Genewise1Plus.C_1210006
I
0.867
KNAG_0E02120
Kazachstania naganishii
KNAG_0E02120
I
0.836
EFA75635.1
Polysphondylium pallidum
EFA75635.1
I
0.836
fgenesh1_pg.C_chr_6.1000068
Pichia stipitis
fgenesh1_pg.C_chr_6.1000068
I
0.832
PICST_32587
Scheffersomyces stipitis
PICST_32587
I
0.832
SAKL0A06842g
Lachancea kluyveri
SAKL0A06842g
I
0.831
LALA0_S07e00188g
Lachancea lanzarotensis
LALA0_S07e00188g
I
0.827
KLTH0H06314g
Lachancea thermotolerans
KLTH0H06314g
I
0.823
KLTH0H06314g
Kluyveromyces thermotolerans
KLTH0H06314g
I
0.823
Kwal_1746
Kluyveromyces waltii
Kwal_1746
I
0.821
Kpol_385p3
Vanderwaltozyma polyspora
Kpol_385p3
I
0.821
EFA81457.1
Polysphondylium pallidum
EFA81457.1
I
0.810
estExt_fgeneshDP_pg.C_5480001
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_5480001
I
0.810
gtaN
Dictyostelium discoideum
DDB_G0287057
D
0.810
KAFR_0F02680
Kazachstania africana
KAFR_0F02680
I
0.805
RHTO_02844
Rhodosporidium toruloides
RHTO_02844
I
0.803
M408DRAFT_61538
Serendipita vermifera
M408DRAFT_61538
I
0.802