CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSDORG00000013564
(
Dipodomys ordii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
ENSDORG00000013564
T192680_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS
STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.847
0.714
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD
HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.847
0.714
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD
HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.847
0.714
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG
CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.847
0.714
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN
NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.823
0.686
nit-2
M10601_2.00
Neurospora crassa
DHGATA
TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.823
0.686
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000012755
GATA
116
150
CSNCHTATTTLWRRNAEGEPVCNACGLYMKLHGVP
Links
Other
GATA
family TFs
Other
Dipodomys ordii
TFs
437 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_09143
Coccidioides immitis
CIMG_09143
N
0.000
PV07_00549
Cladophialophora immunda
PV07_00549
N
0.000
HCBG_04841
Histoplasma capsulatum
HCBG_04841
N
0.000
G647_07645
Cladophialophora carrionii
G647_07645
N
0.000
EURHEDRAFT_413572
Aspergillus ruber
EURHEDRAFT_413572
N
0.000
EPUS_02719
Endocarpon pusillum
EPUS_02719
N
0.000
BDDG_05300
Blastomyces dermatitidis
BDDG_05300
N
0.000
A1O5_01422
Cladophialophora psammophila
A1O5_01422
N
0.000
A1O1_02936
Capronia coronata
A1O1_02936
N
0.000
Z517_01449
Fonsecaea pedrosoi
Z517_01449
N
0.000