GLYMA04G01090 (Glycine max)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GLYMA04G01090 T193465_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN

NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.857 0.833
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY

RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.857 0.833
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN

NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.853 0.889
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH

DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.853 0.889
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN

NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.847 0.806
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN

NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.847 0.806
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR

YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.847 0.806
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN

NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.847 0.806
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN

NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.839 0.889
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN

NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.837 0.833
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN

NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.833 0.778
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.832 0.806
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN

NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.832 0.778
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG

CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.832 0.778
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB

VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.832 0.778
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA

TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.819 0.722
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH

DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.819 0.722
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH

DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA04G01090.2 GATA 220 255
GLYMA04G01090.3 GATA 220 255

Links

Other GATA family TFs
Other Glycine max TFs

613 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_01367 Capronia coronata A1O1_01367 N 0.000
A1O1_02535 Capronia coronata A1O1_02535 N 0.000
A1O3_08973 Capronia epimyces A1O3_08973 N 0.000
A1O5_00510 Cladophialophora psammophila A1O5_00510 N 0.000
A1O7_01450 Cladophialophora yegresii A1O7_01450 N 0.000
BAUCODRAFT_39585 Baudoinia compniacensis BAUCODRAFT_39585 N 0.000
CADAFLAG00003334 Aspergillus flavus CADAFLAG00003334 N 0.000
AFUA_4G03670 Aspergillus fumigatus CADAFUAG00001341 N 0.000
CADANGAG00011084 Aspergillus niger CADANGAG00011084 N 0.000
ANIA_05775 Aspergillus nidulans CADANIAG00003279 N 0.000
NFIA_029740 Neosartorya fischeri CADNFIAG00002822 N 0.000
COCC4DRAFT_130965 Bipolaris maydis COCC4DRAFT_130965 N 0.000
COCCADRAFT_40088 Bipolaris zeicola COCCADRAFT_40088 N 0.000
COCMIDRAFT_30122 Bipolaris oryzae COCMIDRAFT_30122 N 0.000
COCSADRAFT_34052 Bipolaris sorokiniana COCSADRAFT_34052 N 0.000
COCVIDRAFT_20793 Bipolaris victoriae COCVIDRAFT_20793 N 0.000
DOTSEDRAFT_75032 Dothistroma septosporum DOTSEDRAFT_75032 N 0.000
estExt_Genewise1Plus.C_70733 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_70733 N 0.000
fgenesh1_pm.00795_#_100 Aspergillus carbonarius fgenesh1_pm.00795_#_100 N 0.000
G647_01519 Cladophialophora carrionii G647_01519 N 0.000
HMPREF1624_03990 Sporothrix schenckii HMPREF1624_03990 N 0.000
LEMA_P012820.1 Leptosphaeria maculans LEMA_P012820.1 N 0.000
MELLADRAFT_114391 Melampsora laricipopulina MELLADRAFT_114391 N 0.000
OIDMADRAFT_117559 Oidiodendron maius OIDMADRAFT_117559 N 0.000
PAAG_00881 Paracoccidioides sp lutzii PAAG_00881 N 0.000
PABG_01362 Paracoccidioides brasiliensis PABG_01362 N 0.000
Pc14g01370 Penicillium chrysogenum Pc14g01370 N 0.000
Pc21g06560 Penicillium chrysogenum Pc21g06560 N 0.000
PCH_Pc14g01370 Penicillium rubens PCH_Pc14g01370 N 0.000
PCH_Pc21g06560 Penicillium rubens PCH_Pc21g06560 N 0.000
PDE_02517 Penicillium oxalicum PDE_02517 N 0.000
PEX1_062920 Penicillium expansum PEX1_062920 N 0.000
PGTG_11917 Puccinia graminis PGTG_11917 N 0.000
PMAA_046590 Talaromyces marneffei PMAA_046590 N 0.000
PMAA_046590 Penicillium marneffei PMAA_046590 N 0.000
PV04_00511 Capronia semiimmersa PV04_00511 N 0.000
PV05_10000 Exophiala xenobiotica PV05_10000 N 0.000
PV06_07837 Exophiala oligosperma PV06_07837 N 0.000
PV08_04909 Exophiala spinifera PV08_04909 N 0.000
PV08_11848 Exophiala spinifera PV08_11848 N 0.000
PV08_12089 Exophiala spinifera PV08_12089 N 0.000
PV09_07855 Verruconis gallopava PV09_07855 N 0.000
PV10_03009 Exophiala mesophila PV10_03009 N 0.000
PV11_10054 Exophiala sideris PV11_10054 N 0.000
SETTUDRAFT_92771 Setosphaeria turcica SETTUDRAFT_92771 N 0.000
SNOG_11030 Phaeosphaeria nodorum SNOG_11030 N 0.000
SNOG_11030 Stagonospora nodorum SNOG_11030 N 0.000
TRIVIDRAFT_66228 Trichoderma virens TRIVIDRAFT_66228 N 0.000
Z518_05059 Rhinocladiella mackenziei Z518_05059 N 0.000
Z519_00518 Cladophialophora bantiana Z519_00518 N 0.000