CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_Achr2G16730_001
(
Musa acuminata
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
GSMUA_Achr2G16730_001
T193596_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN
NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.811
0.806
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.811
0.806
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr2P16730_001
GATA
83
118
CSICKTTKTPLWRGGPRGPKSLCNACGIRQRKARRA
Links
Other
GATA
family TFs
Other
Musa acuminata
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy