GSMUA_Achr6G26330_001 (Musa acuminata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GSMUA_Achr6G26330_001 T193618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.857 0.861
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN

NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.856 0.917
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG

CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.856 0.917
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB

VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.856 0.917
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN

NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.848 0.917
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN

NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.847 0.806
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH

DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.847 0.806
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN

NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.843 0.889
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR

YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.843 0.889
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN

NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.843 0.889
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN

NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.843 0.833
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN

NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.837 0.861
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY

RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.837 0.861
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA

TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.819 0.778
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH

DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.819 0.778
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH

DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.819 0.778
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN

NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.819 0.750
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN

NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P26330_001 GATA 190 225

Links

Other GATA family TFs
Other Musa acuminata TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000016240 Astyanax mexicanus ENSAMXG00000016240 I 0.000
cbt Drosophila melanogaster FBgn0043364 D 0.000
cbt Drosophila pseudoobscura FBgn0078183 I 0.000
cbt Drosophila ananassae FBgn0101744 I 0.000
cbt Drosophila erecta FBgn0116778 I 0.000
cbt Drosophila grimshawi FBgn0117994 I 0.000
cbt Drosophila mojavensis FBgn0140770 I 0.000
cbt Drosophila sechellia FBgn0171577 I 0.000
cbt Drosophila simulans FBgn0194348 I 0.000
cbt Drosophila virilis FBgn0206865 I 0.000
cbt Drosophila willistoni FBgn0226609 I 0.000
cbt Drosophila yakuba FBgn0233632 I 0.000
LCUP009846 Lucilia cuprina LCUP009846 I 0.000
LDEC016289 Leptinotarsa decemlineata LDEC016289 I 0.000
MDOA003755 Musca domestica MDOA003755 I 0.000
MDOA014851 Musca domestica MDOA014851 I 0.000
klf15.2 Xenopus tropicalis XB-GENE-1018580 I 0.000