CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSTUM_00007548001
(
Tuber melanosporum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
GSTUM_00007548001
T193635_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.825
0.861
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAZ83744
GATA
748
783
CANCHTRVTPEWRRGPSGKRDLCNSCGLRYAKLIGR
Links
Other
GATA
family TFs
Other
Tuber melanosporum
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy