HelroG82644 (Helobdella robusta)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 HelroG82644 T193719_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pnr
M03757_2.00
Drosophila melanogaster
NGATAAGATAASN

NSTTATCTTATCN
SELEX
Nitta et al.(2015)
pnr_1
0.811 0.814
pnr
M03758_2.00
Drosophila melanogaster
NHGATAASV

BSTTATCDN
SELEX
Nitta et al.(2015)
pnr_2
0.811 0.814
pnr
M06204_2.00
Drosophila melanogaster
BWGATAA

TTATCWV
B1H
Zhu et al.(2011)
pnr_SANGER_5_FBgn0003117
0.811 0.814
pnr
M08204_2.00
Drosophila melanogaster
ANHNNBHGATAASSDNNB

VNNHSSTTATCDVNNDNT
ChIP-seq
Contrino et al.(2012)
Mf28
0.811 0.814
pnr
M08418_2.00
Drosophila melanogaster
YATCGATWKBY

RVMWATCGATR
ChIP-chip
Mathelier et al.(2014)
MA0536.1
0.811 0.814
Gata3
M00166_2.00
Mus musculus
NNNHGATHNN

NNDATCDNNN
PBM
Badis et al.(2009)
Gata3_1024
0.805 0.771
GATA3
M03063_2.00
Homo sapiens
HGATARVV

BBYTATCD
SELEX
Jolma et al.(2013)
GATA3_1
0.805 0.771
GATA3
M03064_2.00
Homo sapiens
HGATAAVV

BBTTATCD
SELEX
Jolma et al.(2013)
GATA3_2
0.805 0.771
grn
M03754_2.00
Drosophila melanogaster
HGATAASV

BSTTATCD
SELEX
Nitta et al.(2015)
grn_1
0.805 0.771
grn
M03755_2.00
Drosophila melanogaster
NHGATAAGNNNCTTATCDN

NHGATAAGNNNCTTATCDN
SELEX
Nitta et al.(2015)
grn_2
0.805 0.771
grn
M03756_2.00
Drosophila melanogaster
NHGATAACNNNGTTATCDN

NHGATAACNNNGTTATCDN
SELEX
Nitta et al.(2015)
grn_3
0.805 0.771
GATA2
M04879_2.00
Homo sapiens
VHGATAHSV

BSDTATCDB
SELEX
Yin et al.(2017)
GATA2_eDBD_HT-SELEX
0.805 0.771
GATA3
M04863_2.00
Homo sapiens
HGATAASRATCW

WGATYSTTATCD
SELEX
Yin et al.(2017)
GATA3_FL_HT-SELEX_1
0.805 0.771
GATA3
M04864_2.00
Homo sapiens
HGATAASATCD

HGATSTTATCD
SELEX
Yin et al.(2017)
GATA3_FL_HT-SELEX_2
0.805 0.771
Gata3
M05867_2.00
Mus musculus
GATAAN

NTTATC
SMiLE-seq
Isakova et al.(2017)
GATA3
0.805 0.771
GATA2
M08125_2.00
Homo sapiens
NNAGATAAGNN

NNCTTATCTNN
ChIP-seq
Mathelier et al.(2014)
MA0036.3
0.805 0.771
GATA2
M07966_2.00
Homo sapiens
NVWGATAAVVN

NBBTTATCWBN
ChIP-seq
Gerstein et al.(2012)
HUVEC_GATA2_UCD
0.805 0.771
GATA2
M07967_2.00
Homo sapiens
BKNNNNNNNSWGATAASV

BSTTATCWSNNNNNNNMV
ChIP-seq
Gerstein et al.(2012)
K562b_GATA2_UCD
0.805 0.771
GATA2
M07968_2.00
Homo sapiens
NNKNNNNNNNVWGATAAV

BTTATCWBNNNNNNNMNN
ChIP-seq
Gerstein et al.(2012)
K562_GATA2_HudsonAlpha
0.805 0.771
GATA2
M07969_2.00
Homo sapiens
NVWGATAAVV

BBTTATCWBN
ChIP-seq
Gerstein et al.(2012)
K562_GATA2_UChicago
0.805 0.771
GATA2
M07970_2.00
Homo sapiens
VWGATARVVN

NBBYTATCWB
ChIP-seq
Gerstein et al.(2012)
SH-SY5Y_GATA2_UCD
0.805 0.771
GATA3
M07965_2.00
Homo sapiens
NWGATWRNVATCWSN

NSWGATBNYWATCWN
ChIP-seq
Gerstein et al.(2012)
T-47D_GATA3_HudsonAlpha
0.805 0.771
GATA2
M09119_2.00
Homo sapiens
NKKNNNNNNDVAGATAASV

BSTTATCTBHNNNNNNMMN
Misc
Kulakovskiy et al.(2013)
GATA2_HUMAN.H11MO.0.A
0.805 0.771
GATA3
M09116_2.00
Homo sapiens
DVAGATAAVRD

HYBTTATCTBH
Misc
Kulakovskiy et al.(2013)
GATA3_HUMAN.H11MO.0.A
0.805 0.771
Gata2
M09121_2.00
Mus musculus
DVAGATAASVN

NBSTTATCTBH
Misc
Kulakovskiy et al.(2013)
GATA2_MOUSE.H11MO.0.A
0.805 0.771
Gata3
M09122_2.00
Mus musculus
NVWGATAAVVDBH

DVHBBTTATCWBN
Misc
Kulakovskiy et al.(2013)
GATA3_MOUSE.H11MO.0.A
0.805 0.771
GATA2
M09550_2.00
Homo sapiens
VWGATAAGVN

NBCTTATCWB
Misc
Heinz et al.(2010)
K562-GATA2_GSE18829
0.805 0.771
Gata3
M09551_2.00
Mus musculus
AGATBNNNAGATARV

BYTATCTNNNVATCT
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_1
0.805 0.771
Gata3
M09552_2.00
Mus musculus
AGATBDNNNNDSWGATWRNN

NNYWATCWSHNNNNHVATCT
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_2
0.805 0.771
Gata3
M09553_2.00
Mus musculus
NNNNNNWGATNDNATCWNNN

NNNWGATNHNATCWNNNNNN
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_3
0.805 0.771
Gata3
M09554_2.00
Mus musculus
NWGATNNNNATCWNN

NNWGATNNNNATCWN
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_4
0.805 0.771
Gata3
M09555_2.00
Mus musculus
WGATAAVV

BBTTATCW
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_5
0.805 0.771
GATA2
M10594_2.00
Homo sapiens
BVNGATRNBN

NVNYATCNBV
Transfac
Matys et al.(2006)
V$GATA2_01
0.805 0.771
GATA2
M10595_2.00
Homo sapiens
NNWGATAASR

YSTTATCWNN
Transfac
Matys et al.(2006)
V$GATA2_02
0.805 0.771
GATA2
M10596_2.00
Homo sapiens
HSAGATAWBA

TVWTATCWSD
Transfac
Matys et al.(2006)
V$GATA2_03
0.805 0.771
GATA2
M10597_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA2_Q5
0.805 0.771
GATA3
M10586_2.00
Homo sapiens
NNGATDRNR

YNYHATCNN
Transfac
Matys et al.(2006)
V$GATA3_01
0.805 0.771
GATA3
M10587_2.00
Homo sapiens
NRWGATAANA

TNTTATCWYN
Transfac
Matys et al.(2006)
V$GATA3_02
0.805 0.771
GATA3
M10588_2.00
Homo sapiens
ANWGATMWDA

THWKATCWNT
Transfac
Matys et al.(2006)
V$GATA3_03
0.805 0.771
GATA3
M10589_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA3_Q4
0.805 0.771
GATA2
M04880_2.00
Homo sapiens
NHGATADSV

BSHTATCDN
SELEX
Yin et al.(2017)
GATA2_eDBD_Methyl-HT-SELEX
0.805 0.771
GATA3
M04865_2.00
Homo sapiens
WGATAASGATCW

WGATCSTTATCW
SELEX
Yin et al.(2017)
GATA3_FL_Methyl-HT-SELEX_1
0.805 0.771
GATA3
M04866_2.00
Homo sapiens
WGATAASATCW

WGATSTTATCW
SELEX
Yin et al.(2017)
GATA3_FL_Methyl-HT-SELEX_2
0.805 0.771
srp
M03759_2.00
Drosophila melanogaster
NHGATAAVV

BBTTATCDN
SELEX
Nitta et al.(2015)
srp_1
0.805 0.757
srp
M03760_2.00
Drosophila melanogaster
NHGATAABV

BVTTATCDN
SELEX
Nitta et al.(2015)
srp_2
0.805 0.757
srp
M06205_2.00
Drosophila melanogaster
VTCWABCSATAV

BTAWSGVTWGAB
B1H
Zhu et al.(2011)
srp_FlyReg_FBgn0003507
0.805 0.757
srp
M06206_2.00
Drosophila melanogaster
WGATAAGV

BCTTATCW
B1H
Zhu et al.(2011)
srp_SANGER_5_FBgn0003507
0.805 0.757
srp
M09670_2.00
Drosophila melanogaster
KHGATARBV

BVYTATCDM
Misc
Kulakovskiy et al.(2009)
srp
0.805 0.757
GATA1
M02738_2.00
Homo sapiens
GATWASMH

DKSTWATC
SELEX
Jolma et al.(2010)
GATA1_dimer
0.805 0.743
GATA1
M02739_2.00
Homo sapiens
HGATAA

TTATCD
SELEX
Jolma et al.(2010)
GATA1_monomer
0.805 0.743
GATA1
M04861_2.00
Homo sapiens
GATAAKDNHMTTATC

GATAAKDNHMTTATC
SELEX
Yin et al.(2017)
GATA1_eDBD_HT-SELEX
0.805 0.743
GATA1
M07963_2.00
Homo sapiens
NSWGATAASVN

NBSTTATCWSN
ChIP-seq
Gerstein et al.(2012)
K562b_GATA1_UCD
0.805 0.743
GATA1
M07964_2.00
Homo sapiens
NNKNNNNNNNSWGATAAV

BTTATCWSNNNNNNNMNN
ChIP-seq
Gerstein et al.(2012)
PBDE_GATA1_UCD
0.805 0.743
GATA1
M08202_2.00
Homo sapiens
NBKBNNNNNNSWGATAASVN

NBSTTATCWSNNNNNNVMVN
ChIP-seq
Contrino et al.(2012)
Mv73
0.805 0.743
GATA1
M08203_2.00
Homo sapiens
WGATNNNATC

GATNNNATCW
ChIP-seq
Contrino et al.(2012)
Mv75
0.805 0.743
GATA1
M09115_2.00
Homo sapiens
NBKBNNNNNNVWGATAAVV

BBTTATCWBNNNNNNVMVN
Misc
Kulakovskiy et al.(2013)
GATA1_HUMAN.H11MO.0.A
0.805 0.743
GATA1
M09549_2.00
Homo sapiens
SWGATAAGVV

BBCTTATCWS
Misc
Heinz et al.(2010)
K562-GATA1_GSE18829
0.805 0.743
GATA1
M10577_2.00
Homo sapiens
SVNGATDBBN

NVVHATCNBS
Transfac
Matys et al.(2006)
V$GATA1_01
0.805 0.743
GATA1
M10578_2.00
Homo sapiens
NHVNHGATAVKVBN

NVBMBTATCDNBDN
Transfac
Matys et al.(2006)
V$GATA1_02
0.805 0.743
GATA1
M10579_2.00
Homo sapiens
RNSNDGATTRBNRN

NYNVYAATCHNSNY
Transfac
Matys et al.(2006)
V$GATA1_03
0.805 0.743
GATA1
M10580_2.00
Homo sapiens
DNVWGATARVNVN

NBNBYTATCWBNH
Transfac
Matys et al.(2006)
V$GATA1_04
0.805 0.743
GATA1
M10581_2.00
Homo sapiens
VMHGATAAVM

KBTTATCDKB
Transfac
Matys et al.(2006)
V$GATA1_05
0.805 0.743
GATA1
M10582_2.00
Homo sapiens
MNAGATAAVR

YBTTATCTNK
Transfac
Matys et al.(2006)
V$GATA1_06
0.805 0.743
GATA1
M10583_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA1_10
0.805 0.743
GATA1
M10584_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA1_Q6
0.805 0.743
GATA1
M04862_2.00
Homo sapiens
GATAABNNNVTTATC

GATAABNNNVTTATC
SELEX
Yin et al.(2017)
GATA1_eDBD_Methyl-HT-SELEX
0.805 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP82644 GATA 28 62
HelroP82644 GATA 83 117

Links

Other GATA family TFs
Other Helobdella robusta TFs

Invalid Input OrderBy

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action