CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LALA0_S07e00188g
(
Lachancea lanzarotensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
LALA0_S07e00188g
T193907_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaI
M02012_2.00
Dictyostelium discoideum
VMGATCKV
BMGATCKB
PBM
Weirauch et al.(2014)
pTH5406
0.827
0.694
gtaN
M02014_2.00
Dictyostelium discoideum
NNMGATNNN
NNNATCKNN
PBM
Weirauch et al.(2014)
pTH5355
0.810
0.694
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEP63002
GATA
335
370
CAHCSTTKTPEWRKGPYGKRSLCNACGLFYKKLVRK
Links
Other
GATA
family TFs
Other
Lachancea lanzarotensis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Kwal_1746
Kluyveromyces waltii
Kwal_1746
I
0.861
KLTH0H06314g
Lachancea thermotolerans
KLTH0H06314g
I
0.851
KLTH0H06314g
Kluyveromyces thermotolerans
KLTH0H06314g
I
0.851
Kpol_385p3
Vanderwaltozyma polyspora
Kpol_385p3
I
0.850
SAKL0A06842g
Lachancea kluyveri
SAKL0A06842g
I
0.842
fgenesh1_pg.C_chr_6.1000068
Pichia stipitis
fgenesh1_pg.C_chr_6.1000068
I
0.832
PICST_32587
Scheffersomyces stipitis
PICST_32587
I
0.832
KNAG_0E02120
Kazachstania naganishii
KNAG_0E02120
I
0.832
KAFR_0F02680
Kazachstania africana
KAFR_0F02680
I
0.830
gtaI
Dictyostelium discoideum
DDB_G0281661
D
0.827
estExt_Genewise1Plus.C_1210006
Dictyostelium purpureum
estExt_Genewise1Plus.C_1210006
I
0.827
gtaN
Dictyostelium discoideum
DDB_G0287057
D
0.810
EFA81457.1
Polysphondylium pallidum
EFA81457.1
I
0.810
estExt_fgeneshDP_pg.C_5480001
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_5480001
I
0.810
RHTO_02844
Rhodosporidium toruloides
RHTO_02844
I
0.806