CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MELLADRAFT_48582
(
Melampsora laricipopulina
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
MELLADRAFT_48582
T194100_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN
NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.816
0.778
nit-2
M10601_2.00
Neurospora crassa
DHGATA
TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.816
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGG06068
GATA
1
27
TPLWRRNGEGKPLCNACGLFLNLHGIP
Links
Other
GATA
family TFs
Other
Melampsora laricipopulina
TFs
197 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy