MTR_6g032830 (Medicago truncatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MTR_6g032830 T194213_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN

NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.862 0.861
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH

DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.862 0.861
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN

NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.848 0.861
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY

RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.848 0.861
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN

NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.847 0.806
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG

CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.847 0.806
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB

VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.847 0.806
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.847 0.806
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN

NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.834 0.806
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN

NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.832 0.778
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN

NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.832 0.778
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN

NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.832 0.778
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR

YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.832 0.778
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN

NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.832 0.778
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA

TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.819 0.778
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH

DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.819 0.750
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN

NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.819 0.750
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH

DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES75228 GATA 194 229

Links

Other GATA family TFs
Other Medicago truncatula TFs

609 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_08721 Capronia coronata A1O1_08721 N 0.000
A1O3_08106 Capronia epimyces A1O3_08106 N 0.000
A1O5_04458 Cladophialophora psammophila A1O5_04458 N 0.000
A1O5_11083 Cladophialophora psammophila A1O5_11083 N 0.000
A1O7_03367 Cladophialophora yegresii A1O7_03367 N 0.000
A1O9_03441 Exophiala aquamarina A1O9_03441 N 0.000
A1O9_12648 Exophiala aquamarina A1O9_12648 N 0.000
BDDG_09052 Blastomyces dermatitidis BDDG_09052 N 0.000
AFUA_5G06410 Aspergillus fumigatus CADAFUAG00006238 N 0.000
CADANGAG00013526 Aspergillus niger CADANGAG00013526 N 0.000
ANIA_02270 Aspergillus nidulans CADANIAG00008962 N 0.000
ATEG_09390 Aspergillus terreus CADATEAG00008360 N 0.000
NFIA_036720 Neosartorya fischeri CADNFIAG00003562 N 0.000
CIMG_06012 Coccidioides immitis CIMG_06012 N 0.000
CPC735_025940 Coccidioides posadasii CPC735_025940 N 0.000
EPUS_04193 Endocarpon pusillum EPUS_04193 N 0.000
estExt_Genewise1Plus.C_150467 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_150467 N 0.000
EURHEDRAFT_414224 Aspergillus ruber EURHEDRAFT_414224 N 0.000
fgenesh1_pm.00162_#_137 Aspergillus carbonarius fgenesh1_pm.00162_#_137 N 0.000
G647_03415 Cladophialophora carrionii G647_03415 N 0.000
G647_05017 Cladophialophora carrionii G647_05017 N 0.000
H101_07203 Trichophyton interdigitale H101_07203 N 0.000
H102_04274 Trichophyton rubrum H102_04274 N 0.000
H105_04299 Trichophyton soudanense H105_04299 N 0.000
HMPREF1120_09222 Exophiala dermatitidis HMPREF1120_09222 N 0.000
HMPREF1541_04963 Cyphellophora europaea HMPREF1541_04963 N 0.000
HMPREF1541_06758 Cyphellophora europaea HMPREF1541_06758 N 0.000
MCYG_06896 Arthroderma otae MCYG_06896 N 0.000
MCYG_06896 Microsporum canis MCYG_06896 N 0.000
MGYG_03712 Microsporum gypseum MGYG_03712 N 0.000
Pc21g17490 Penicillium chrysogenum Pc21g17490 N 0.000
PCH_Pc21g17490 Penicillium rubens PCH_Pc21g17490 N 0.000
PDE_09355 Penicillium oxalicum PDE_09355 N 0.000
PMAA_036960 Penicillium marneffei PMAA_036960 N 0.000
PMAA_036960 Talaromyces marneffei PMAA_036960 N 0.000
PV04_03557 Capronia semiimmersa PV04_03557 N 0.000
PV04_03941 Capronia semiimmersa PV04_03941 N 0.000
PV05_05879 Exophiala xenobiotica PV05_05879 N 0.000
PV05_07172 Exophiala xenobiotica PV05_07172 N 0.000
PV06_00153 Exophiala oligosperma PV06_00153 N 0.000
PV07_04661 Cladophialophora immunda PV07_04661 N 0.000
PV07_06727 Cladophialophora immunda PV07_06727 N 0.000
PV08_09743 Exophiala spinifera PV08_09743 N 0.000
PV10_05359 Exophiala mesophila PV10_05359 N 0.000
PV11_00858 Exophiala sideris PV11_00858 N 0.000
PV11_02684 Exophiala sideris PV11_02684 N 0.000
PVAR5_7243 Byssochlamys spectabilis PVAR5_7243 N 0.000
TSTA_055160 Talaromyces stipitatus TSTA_055160 N 0.000
Z517_05815 Fonsecaea pedrosoi Z517_05815 N 0.000
Z517_10400 Fonsecaea pedrosoi Z517_10400 N 0.000
Z518_01292 Rhinocladiella mackenziei Z518_01292 N 0.000
Z518_11251 Rhinocladiella mackenziei Z518_11251 N 0.000
Z519_02290 Cladophialophora bantiana Z519_02290 N 0.000
Z519_06883 Cladophialophora bantiana Z519_06883 N 0.000