MTR_8g077510 (Medicago truncatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MTR_8g077510 T194223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.838 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.838 0.917
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.818 0.917
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.818 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET03916 GATA 127 162

Links

Other GATA family TFs
Other Medicago truncatula TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.18351s0307 Boechera stricta Bostr.18351s0307 I 0.838
Bra039614 Brassica rapa Bra039614 I 0.838
GATA20 Arabidopsis lyrata Al_scaffold_0003_3815 I 0.838
Bra037221 Brassica rapa Bra037221 I 0.838
Carubv10014541m.g Capsella rubella Carubv10014541m.g I 0.838
Thhalv10022854m.g Eutrema salsugineum Thhalv10022854m.g I 0.838
GATA20 Arabidopsis thaliana AT2G18380 D 0.838
Bo9g026020 Brassica oleracea Bo9g026020 I 0.833
OBART01G25510 Oryza barthii OBART01G25510 I 0.831
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I 0.831
OB05G34480 Oryza brachyantha OB05G34480 I 0.831
LPERR05G21780 Leersia perrieri LPERR05G21780 I 0.831
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I 0.831
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I 0.831
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I 0.831
LPERR01G21790 Leersia perrieri LPERR01G21790 I 0.831
MLOC_5372 Hordeum vulgare MLOC_5372 I 0.831
OMERI01G23200 Oryza meridionalis OMERI01G23200 I 0.831
OB01G34710 Oryza brachyantha OB01G34710 I 0.831
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I 0.831
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I 0.831
Ca_16057 Cicer arietinum Ca_16057 I 0.831
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I 0.831
Pavir.J03293 Panicum virgatum Pavir.J03293 I 0.831
Pavir.J26908 Panicum virgatum Pavir.J26908 I 0.831
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I 0.831
Si024214m.g Setaria italica Si024214m.g I 0.831
OPUNC05G23750 Oryza punctata OPUNC05G23750 I 0.831
OPUNC01G25380 Oryza punctata OPUNC01G25380 I 0.831
GRMZM2G123909 Zea mays GRMZM2G123909 I 0.831
OS01G0662800 Oryza sativa OS01G0662800 I 0.831
Sb03g030310 Sorghum bicolor Sb03g030310 I 0.831
ONIVA01G28750 Oryza nivara ONIVA01G28750 I 0.831
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I 0.831
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I 0.831
BGIOSGA001076 Oryza indica BGIOSGA001076 I 0.831
F775_00859 Aegilops tauschii F775_00859 I 0.831
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I 0.831
OPUNC05G24550 Oryza punctata OPUNC05G24550 I 0.827
ONIVA05G29020 Oryza nivara ONIVA05G29020 I 0.827
OMERI03G30220 Oryza meridionalis OMERI03G30220 I 0.827
OMERI05G23010 Oryza meridionalis OMERI05G23010 I 0.827
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I 0.827
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I 0.827
BGIOSGA017544 Oryza indica BGIOSGA017544 I 0.827
GATA15 Oryza indica BGIOSGA020424 I 0.827
Sb09g028850 Sorghum bicolor Sb09g028850 I 0.827
GATA15 Oryza sativa OS05G0578900 I 0.827
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I 0.827
OS05G0567900 Oryza sativa OS05G0567900 I 0.827
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I 0.827
ORGLA05G0226400 Oryza glaberrima ORGLA05G0226400 I 0.827
OBART05G26150 Oryza barthii OBART05G26150 I 0.827
LPERR05G22620 Leersia perrieri LPERR05G22620 I 0.827
OGLUM05G27770 Oryza glumaepatula OGLUM05G27770 I 0.827
GRMZM2G397616 Zea mays GRMZM2G397616 I 0.822
Cla014435 Citrullus lanatus Cla014435 I 0.820
Cucsa.127470 Cucumis sativus Cucsa.127470 I 0.820
GSMUA_Achr11G17770_001 Musa acuminata GSMUA_Achr11G17770_001 I 0.819
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I 0.818
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I 0.818
Carubv10007612m.g Capsella rubella Carubv10007612m.g I 0.818
PK24471.1 Cannabis sativa PK24471.1 I 0.818
GATA19 Arabidopsis thaliana AT4G36620 D 0.818
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I 0.818
cassava21185.m1 Manihot esculenta cassava21185.m1 I 0.818
Carubv10017765m.g Capsella rubella Carubv10017765m.g I 0.818
mgf023982m Mimulus guttatus mgf023982m I 0.818
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I 0.818
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I 0.818
cassava5664.m1 Manihot esculenta cassava5664.m1 I 0.818
Cucsa.106490 Cucumis sativus Cucsa.106490 I 0.818
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I 0.818
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I 0.818
Lus10028301.g Linum usitatissimum Lus10028301.g I 0.818
29634.m002146 Ricinus communis 29634.m002146 I 0.818
MDP0000253174 Malus domestica MDP0000253174 I 0.818
MDP0000310271 Malus domestica MDP0000310271 I 0.818
GATA18 Arabidopsis thaliana AT3G50870 I 0.818
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I 0.818
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I 0.818
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I 0.818
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I 0.818
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I 0.818
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I 0.818
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I 0.818
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I 0.818
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I 0.818
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I 0.818
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I 0.818
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I 0.818
Bra010563 Brassica rapa Bra010563 I 0.818
Bra012080 Brassica rapa Bra012080 I 0.818
Bo8g080330 Brassica oleracea Bo8g080330 I 0.818
Pm026628 Prunus mume Pm026628 I 0.818
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I 0.818
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I 0.818
Bra012883 Brassica rapa Bra012883 I 0.818
Bra017766 Brassica rapa Bra017766 I 0.818
GLYMA11G07350 Glycine max GLYMA11G07350 I 0.818
GLYMA16G25370 Glycine max GLYMA16G25370 I 0.818
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I 0.818
MTR_5g020230 Medicago truncatula MTR_5g020230 I 0.818
Bra036854 Brassica rapa Bra036854 I 0.818
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I 0.818
Bo7g118030 Brassica oleracea Bo7g118030 I 0.818
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I 0.818
TCM_000376 Theobroma cacao TCM_000376 I 0.818
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I 0.818
MNP Vitis vinifera VIT_04s0023g01840 I 0.818
Bo7g064860 Brassica oleracea Bo7g064860 I 0.818
Ca_02038 Cicer arietinum Ca_02038 I 0.818
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I 0.818
Bo7g100580 Brassica oleracea Bo7g100580 I 0.818
Cla014810 Citrullus lanatus Cla014810 I 0.818
GLYMA02G06320 Glycine max GLYMA02G06320 I 0.816
MLOC_62522 Hordeum vulgare MLOC_62522 I 0.813
F775_42893 Aegilops tauschii F775_42893 I 0.813
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I 0.813
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I 0.813
Si022366m.g Setaria italica Si022366m.g I 0.813
Pavir.J18346 Panicum virgatum Pavir.J18346 I 0.813
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I 0.813
Sb09g029510 Sorghum bicolor Sb09g029510 I 0.813
GLYMA11G25375 Glycine max GLYMA11G25375 I 0.807
Bra011695 Brassica rapa Bra011695 I 0.807
Bo7g010220 Brassica oleracea Bo7g010220 I 0.807
Bo1g005530 Brassica oleracea Bo1g005530 I 0.807