OGLUM06G27650 (Oryza glumaepatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OGLUM06G27650 T194399_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS06G0698900
M02015_2.00
Oryza sativa
NNNNAHBNN

NNVDTNNNN
PBM
Weirauch et al.(2014)
pTH8641
0.867 1.000
GATA24
M01941_2.00
Arabidopsis thaliana
HGATBNN

NNVATCD
PBM
Weirauch et al.(2014)
pTH7661
0.857 0.861
GATA28
M01996_2.00
Arabidopsis thaliana
NNGATNN

NNATCNN
PBM
Weirauch et al.(2014)
pTH7505
0.851 0.833
GATA28
M06883_2.00
Arabidopsis thaliana
GATGATGATGATGATGATG

CATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
ZML2_col_a
0.851 0.833
ZIM
M06892_2.00
Arabidopsis thaliana
AWYSRACGGYYVWGA

TCWBRRCCGTYSRWT
Dap-seq
OMalley et al.(2016)
ZIM_col_a
0.810 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G27650.1 GATA 258 295

Links

Other GATA family TFs
Other Oryza glumaepatula TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ONIVA06G28780 Oryza nivara ONIVA06G28780 I 0.867
OPUNC02G02970 Oryza punctata OPUNC02G02970 I 0.867
OPUNC06G23830 Oryza punctata OPUNC06G23830 I 0.867
OLONG_015069 Oryza longistaminata OLONG_015069 I 0.867
GRMZM2G080509 Zea mays GRMZM2G080509 I 0.867
GSMUA_Achr3G05620_001 Musa acuminata GSMUA_Achr3G05620_001 I 0.867
OBART06G26250 Oryza barthii OBART06G26250 I 0.867
ORGLA06G0219100 Oryza glaberrima ORGLA06G0219100 I 0.867
BRADI1G33980 Brachypodium distachyon BRADI1G33980 I 0.867
PRUPE_ppa009709mg Prunus persica PRUPE_ppa009709mg I 0.867
OS06G0698900 Oryza sativa OS06G0698900 D 0.867
Pm013048 Prunus mume Pm013048 I 0.867
ORUFI06G28170 Oryza rufipogon ORUFI06G28170 I 0.867
BGIOSGA020596 Oryza indica BGIOSGA020596 I 0.865
OMERI06G26410 Oryza meridionalis OMERI06G26410 I 0.865
PDK_20s1340921g001 Phoenix dactylifera PDK_20s1340921g001 I 0.862
Cucsa.359570 Cucumis sativus Cucsa.359570 I 0.862
OBART02G03780 Oryza barthii OBART02G03780 I 0.862
OB06G33840 Oryza brachyantha OB06G33840 I 0.862
OB02G13220 Oryza brachyantha OB02G13220 I 0.862
OGLUM02G03560 Oryza glumaepatula OGLUM02G03560 I 0.862
ORGLA02G0035000 Oryza glaberrima ORGLA02G0035000 I 0.862
ONIVA02G03810 Oryza nivara ONIVA02G03810 I 0.862
ORUFI02G03830 Oryza rufipogon ORUFI02G03830 I 0.862
OMERI02G04610 Oryza meridionalis OMERI02G04610 I 0.862
GATA17 Oryza sativa OS02G0148500 I 0.862
LPERR06G21800 Leersia perrieri LPERR06G21800 I 0.862
Sb10g028750 Sorghum bicolor Sb10g028750 I 0.862
LPERR02G03330 Leersia perrieri LPERR02G03330 I 0.862
GRMZM2G058479 Zea mays GRMZM2G058479 I 0.862
BGIOSGA007539 Oryza indica BGIOSGA007539 I 0.862
ZML1 Arabidopsis lyrata fgenesh2_kg.3__2338__AT3G21175.1 I 0.862
Cla015736 Citrullus lanatus Cla015736 I 0.861
Si006750m.g Setaria italica Si006750m.g I 0.857
Pavir.Db00254 Panicum virgatum Pavir.Db00254 I 0.857
Pavir.Da00166 Panicum virgatum Pavir.Da00166 I 0.857
PDK_20s1879741g001 Phoenix dactylifera PDK_20s1879741g001 I 0.857
GATA24 Arabidopsis thaliana AT3G21175 D 0.857
GSMUA_Achr2G04520_001 Musa acuminata GSMUA_Achr2G04520_001 I 0.852
fgenesh2_pm.scaffold_111000001 Physcomitrella patens fgenesh2_pm.scaffold_111000001 I 0.851
e_gw1.226.30.1 Physcomitrella patens e_gw1.226.30.1 I 0.851
fgenesh1_pm.scaffold_69000012 Physcomitrella patens fgenesh1_pm.scaffold_69000012 I 0.851
TCM_027858 Theobroma cacao TCM_027858 I 0.851
Traes_7AL_EA6F4FFDE Triticum aestivum Traes_7AL_EA6F4FFDE I 0.851
TRIUR3_11107 Triticum urartu TRIUR3_11107 I 0.851
Ca_17522 Cicer arietinum Ca_17522 I 0.851
Traes_7DL_A5ECEDA95 Triticum aestivum Traes_7DL_A5ECEDA95 I 0.851
Carubv10009866m.g Capsella rubella Carubv10009866m.g I 0.851
SapurV1A.0036s1170 Salix purpurea SapurV1A.0036s1170 I 0.851
Thhalv10011695m.g Eutrema salsugineum Thhalv10011695m.g I 0.851
Thhalv10020970m.g Eutrema salsugineum Thhalv10020970m.g I 0.851
GATA28 Arabidopsis thaliana AT1G51600 D 0.851
orange1.1g022728m.g Citrus sinensis orange1.1g022728m.g I 0.851
Eucgr.J03166 Eucalyptus grandis Eucgr.J03166 I 0.851
Aquca_007_00522 Aquilegia coerulea Aquca_007_00522 I 0.851
Bostr.26675s0048 Boechera stricta Bostr.26675s0048 I 0.851
Cagra.2346s0015 Capsella grandiflora Cagra.2346s0015 I 0.851
Ciclev10027306m.g Citrus clementina Ciclev10027306m.g I 0.851
gw1.68.123.1 Physcomitrella patens gw1.68.123.1 I 0.851
VIT_09s0054g00440 Vitis vinifera VIT_09s0054g00440 I 0.851
POPTR_0010s25810 Populus trichocarpa POPTR_0010s25810 I 0.851
ZML2 Arabidopsis lyrata scaffold_104929.1 I 0.851
GLYMA08G23720 Glycine max GLYMA08G23720 I 0.851
Bo3g181450 Brassica oleracea Bo3g181450 I 0.851
MLOC_17061 Hordeum vulgare MLOC_17061 I 0.851
GSMUA_Achr9G13870_001 Musa acuminata GSMUA_Achr9G13870_001 I 0.851
evm.TU.supercontig_155.28 Carica papaya evm.TU.supercontig_155.28 I 0.850
Bra014292 Brassica rapa Bra014292 I 0.850
F775_08559 Aegilops tauschii F775_08559 I 0.848
Aquca_018_00034 Aquilegia coerulea Aquca_018_00034 I 0.848
GSMUA_Achr7G08720_001 Musa acuminata GSMUA_Achr7G08720_001 I 0.848
GSMUA_Achr10G06260_001 Musa acuminata GSMUA_Achr10G06260_001 I 0.848
Traes_6DS_6268D31AE Triticum aestivum Traes_6DS_6268D31AE I 0.848
Traes_6AS_4106E8E28 Triticum aestivum Traes_6AS_4106E8E28 I 0.848
Traes_6BS_AB5909D02 Triticum aestivum Traes_6BS_AB5909D02 I 0.848
MLOC_3107 Hordeum vulgare MLOC_3107 I 0.848
TRIUR3_32095 Triticum urartu TRIUR3_32095 I 0.848
Bo1g108240 Brassica oleracea Bo1g108240 I 0.847
Bo5g103560 Brassica oleracea Bo5g103560 I 0.847
SELMODRAFT_177195 Selaginella moellendorffii SELMODRAFT_177195 I 0.847
Bra031258 Brassica rapa Bra031258 I 0.847
Carubv10016131m.g Capsella rubella Carubv10016131m.g I 0.847
Bra023900 Brassica rapa Bra023900 I 0.847
SELMODRAFT_423855 Selaginella moellendorffii SELMODRAFT_423855 I 0.847
Cagra.1757s0004 Capsella grandiflora Cagra.1757s0004 I 0.847
LPERR11G14110 Leersia perrieri LPERR11G14110 I 0.846
mgf016112m Mimulus guttatus mgf016112m I 0.843
Pm022163 Prunus mume Pm022163 I 0.837
POPTR_0007s03130 Populus trichocarpa POPTR_0007s03130 I 0.837
PRUPE_ppa009401mg Prunus persica PRUPE_ppa009401mg I 0.837
SapurV1A.0187s0150 Salix purpurea SapurV1A.0187s0150 I 0.837
29838.m001724 Ricinus communis 29838.m001724 I 0.837
TCM_007360 Theobroma cacao TCM_007360 I 0.837
Gorai.008G017800 Gossypium raimondii Gorai.008G017800 I 0.837
cassava6876.valid.m1 Manihot esculenta cassava6876.valid.m1 I 0.832
Aquca_010_00250 Aquilegia coerulea Aquca_010_00250 I 0.832
Cucsa.218190 Cucumis sativus Cucsa.218190 I 0.832
cassava12169.valid.m1 Manihot esculenta cassava12169.valid.m1 I 0.832
POPTR_0017s06980 Populus trichocarpa POPTR_0017s06980 I 0.831
Cla013127 Citrullus lanatus Cla013127 I 0.831
BRADI3G03800 Brachypodium distachyon BRADI3G03800 I 0.829
MTR_4g008070 Medicago truncatula MTR_4g008070 I 0.819
LjSGA_067759.1 Lotus japonicus LjSGA_067759.1 I 0.819
Bo1g039000 Brassica oleracea Bo1g039000 I 0.810
Thhalv10025795m.g Eutrema salsugineum Thhalv10025795m.g I 0.810
MTR_3g100050 Medicago truncatula MTR_3g100050 I 0.810
TIFY1 Arabidopsis lyrata fgenesh2_kg.7__1832__AT4G24470.2 I 0.810
Bostr.7867s0254 Boechera stricta Bostr.7867s0254 I 0.810
ZIM Arabidopsis thaliana AT4G24470 D 0.810
Cagra.2171s0014 Capsella grandiflora Cagra.2171s0014 I 0.810
Carubv10006355m.g Capsella rubella Carubv10006355m.g I 0.810
Bra013805 Brassica rapa Bra013805 I 0.810
Ca_01471 Cicer arietinum Ca_01471 I 0.806