CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI03G02300
(
Oryza meridionalis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
OMERI03G02300
T194431_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI03G02300.1
GATA
169
204
CGHCQTTETPQWRVGPDGPSTLCNACGIRYRMDHLL
Links
Other
GATA
family TFs
Other
Oryza meridionalis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA03G0022100
Oryza glaberrima
ORGLA03G0022100
N
0.867
OGLUM03G02370
Oryza glumaepatula
OGLUM03G02370
N
0.867
OBART03G02440
Oryza barthii
OBART03G02440
N
0.867
LPERR03G02230
Leersia perrieri
LPERR03G02230
N
0.836
OPUNC11G05200
Oryza punctata
OPUNC11G05200
N
0.833
OS11G0187200
Oryza sativa
OS11G0187200
N
0.833
ORUFI11G05240
Oryza rufipogon
ORUFI11G05240
N
0.833
ORGLA11G0198500
Oryza glaberrima
ORGLA11G0198500
N
0.833
BGIOSGA034366
Oryza indica
BGIOSGA034366
N
0.833
ONIVA11G05790
Oryza nivara
ONIVA11G05790
N
0.833
OMERI11G04470
Oryza meridionalis
OMERI11G04470
N
0.833
OBART11G05410
Oryza barthii
OBART11G05410
N
0.833
BGIOSGA034369
Oryza indica
BGIOSGA034369
N
0.833
OGLUM11G05230
Oryza glumaepatula
OGLUM11G05230
N
0.833
Pavir.J33064
Panicum virgatum
Pavir.J33064
N
0.820
Pavir.J15523
Panicum virgatum
Pavir.J15523
N
0.820
Si019572m.g
Setaria italica
Si019572m.g
N
0.820
BRADI4G23550
Brachypodium distachyon
BRADI4G23550
N
0.805
F775_03546
Aegilops tauschii
F775_03546
N
0.805
TRIUR3_28905
Triticum urartu
TRIUR3_28905
N
0.805
Traes_4DS_F0A04A0EC
Triticum aestivum
Traes_4DS_F0A04A0EC
N
0.805