CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA10G11610
(
Oryza nivara
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
ONIVA10G11610
T194469_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA10G11610.1
GATA
69
104
CRHCGTTETPQWRHGPEGHRTLCNACSVRYRSGKLV
ONIVA10G11610.1
GATA
241
276
CAHCGTTKTPAWRLGPDSRRKLCNACGNKYQSGQLN
ONIVA10G11610.1
GATA
397
417
CRHCGSTETPLWHERDGPAEA
ONIVA10G11610.1
GATA
459
494
CTHCGTTKTPAWLSGPDSRGKLCNACGKQYRKGRLV
Links
Other
GATA
family TFs
Other
Oryza nivara
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA10G0109200
Oryza glaberrima
ORGLA10G0109200
N
0.867
BGIOSGA031769
Oryza indica
BGIOSGA031769
N
0.867
OMERI10G09300
Oryza meridionalis
OMERI10G09300
N
0.867
OBART10G12340
Oryza barthii
OBART10G12340
N
0.867
ORUFI10G12920
Oryza rufipogon
ORUFI10G12920
N
0.838