ORGLA05G0226400 (Oryza glaberrima)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 ORGLA05G0226400 T194520_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA19
M06893_2.00
Arabidopsis thaliana
BNGATCBGATY

RATCVGATCNV
Dap-seq
OMalley et al.(2016)
GATA19_col_a
0.848 0.944
GATA19
M06894_2.00
Arabidopsis thaliana
HNGATCBGATY

RATCVGATCND
Dap-seq
OMalley et al.(2016)
GATA19_colamp_a
0.848 0.944
GATA20
M06884_2.00
Arabidopsis thaliana
GATCBGAT

ATCVGATC
Dap-seq
OMalley et al.(2016)
GATA20_col_a
0.807 0.889
GATA20
M06885_2.00
Arabidopsis thaliana
HNGATCNGATBND

HNVATCNGATCND
Dap-seq
OMalley et al.(2016)
GATA20_colamp_a
0.807 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0226400.1 GATA 130 165

Links

Other GATA family TFs
Other Oryza glaberrima TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA017544 Oryza indica BGIOSGA017544 I 0.867
OS05G0567900 Oryza sativa OS05G0567900 I 0.867
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I 0.867
OMERI03G30220 Oryza meridionalis OMERI03G30220 I 0.867
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I 0.862
ONIVA05G29020 Oryza nivara ONIVA05G29020 I 0.862
ONIVA01G28750 Oryza nivara ONIVA01G28750 I 0.862
OMERI01G23200 Oryza meridionalis OMERI01G23200 I 0.862
OMERI05G23010 Oryza meridionalis OMERI05G23010 I 0.862
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I 0.862
OB05G34480 Oryza brachyantha OB05G34480 I 0.862
LPERR01G21790 Leersia perrieri LPERR01G21790 I 0.862
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I 0.862
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I 0.862
LPERR05G21780 Leersia perrieri LPERR05G21780 I 0.862
LPERR05G22620 Leersia perrieri LPERR05G22620 I 0.862
OPUNC01G25380 Oryza punctata OPUNC01G25380 I 0.862
OB01G34710 Oryza brachyantha OB01G34710 I 0.862
MLOC_5372 Hordeum vulgare MLOC_5372 I 0.862
OBART01G25510 Oryza barthii OBART01G25510 I 0.862
OPUNC05G24550 Oryza punctata OPUNC05G24550 I 0.862
Ca_16057 Cicer arietinum Ca_16057 I 0.862
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I 0.862
Si024214m.g Setaria italica Si024214m.g I 0.862
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I 0.862
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I 0.862
Pavir.J26908 Panicum virgatum Pavir.J26908 I 0.862
Pavir.J03293 Panicum virgatum Pavir.J03293 I 0.862
Sb09g028850 Sorghum bicolor Sb09g028850 I 0.862
Sb03g030310 Sorghum bicolor Sb03g030310 I 0.862
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I 0.862
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I 0.862
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I 0.862
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I 0.862
GATA15 Oryza sativa OS05G0578900 I 0.862
OS01G0662800 Oryza sativa OS01G0662800 I 0.862
OPUNC05G23750 Oryza punctata OPUNC05G23750 I 0.862
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I 0.862
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I 0.862
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I 0.862
BGIOSGA001076 Oryza indica BGIOSGA001076 I 0.862
GRMZM2G123909 Zea mays GRMZM2G123909 I 0.862
GATA15 Oryza indica BGIOSGA020424 I 0.862
F775_00859 Aegilops tauschii F775_00859 I 0.862
Cla014435 Citrullus lanatus Cla014435 I 0.851
Cucsa.127470 Cucumis sativus Cucsa.127470 I 0.851
Cucsa.106490 Cucumis sativus Cucsa.106490 I 0.848
mgf023982m Mimulus guttatus mgf023982m I 0.848
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I 0.848
Carubv10007612m.g Capsella rubella Carubv10007612m.g I 0.848
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I 0.848
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I 0.848
GATA18 Arabidopsis thaliana AT3G50870 I 0.848
29634.m002146 Ricinus communis 29634.m002146 I 0.848
Ca_02038 Cicer arietinum Ca_02038 I 0.848
MNP Vitis vinifera VIT_04s0023g01840 I 0.848
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I 0.848
GATA19 Arabidopsis thaliana AT4G36620 D 0.848
Cla014810 Citrullus lanatus Cla014810 I 0.848
cassava21185.m1 Manihot esculenta cassava21185.m1 I 0.848
Carubv10017765m.g Capsella rubella Carubv10017765m.g I 0.848
Pm026628 Prunus mume Pm026628 I 0.848
cassava5664.m1 Manihot esculenta cassava5664.m1 I 0.848
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I 0.848
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I 0.848
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I 0.848
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I 0.848
Pavir.J18346 Panicum virgatum Pavir.J18346 I 0.848
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I 0.848
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I 0.848
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I 0.848
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I 0.848
PK24471.1 Cannabis sativa PK24471.1 I 0.848
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I 0.848
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I 0.848
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I 0.848
TCM_000376 Theobroma cacao TCM_000376 I 0.848
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I 0.848
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I 0.848
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I 0.848
MDP0000310271 Malus domestica MDP0000310271 I 0.848
MDP0000253174 Malus domestica MDP0000253174 I 0.848
Lus10028301.g Linum usitatissimum Lus10028301.g I 0.848
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I 0.848
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I 0.848
MLOC_62522 Hordeum vulgare MLOC_62522 I 0.848
Bo8g080330 Brassica oleracea Bo8g080330 I 0.848
Bo7g118030 Brassica oleracea Bo7g118030 I 0.848
Bo7g100580 Brassica oleracea Bo7g100580 I 0.848
MTR_5g020230 Medicago truncatula MTR_5g020230 I 0.848
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I 0.848
Bra012883 Brassica rapa Bra012883 I 0.848
Bra036854 Brassica rapa Bra036854 I 0.848
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I 0.848
F775_42893 Aegilops tauschii F775_42893 I 0.848
Bra017766 Brassica rapa Bra017766 I 0.848
Bo7g064860 Brassica oleracea Bo7g064860 I 0.848
GLYMA16G25370 Glycine max GLYMA16G25370 I 0.848
Sb09g029510 Sorghum bicolor Sb09g029510 I 0.848
Si022366m.g Setaria italica Si022366m.g I 0.848
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I 0.848
GLYMA11G07350 Glycine max GLYMA11G07350 I 0.848
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I 0.848
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I 0.848
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I 0.848
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I 0.848
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I 0.848
GLYMA02G06320 Glycine max GLYMA02G06320 I 0.847
Bra010563 Brassica rapa Bra010563 I 0.844
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I 0.844
GLYMA11G25375 Glycine max GLYMA11G25375 I 0.838
Bra011695 Brassica rapa Bra011695 I 0.838
Bo1g005530 Brassica oleracea Bo1g005530 I 0.838
OBART05G26150 Oryza barthii OBART05G26150 I 0.831
OGLUM05G27770 Oryza glumaepatula OGLUM05G27770 I 0.831
MTR_8g077510 Medicago truncatula MTR_8g077510 I 0.827
Bra012080 Brassica rapa Bra012080 I 0.818
GSMUA_Achr11G17770_001 Musa acuminata GSMUA_Achr11G17770_001 I 0.815
GRMZM2G325850 Zea mays GRMZM2G325850 I 0.811
GRMZM2G138967 Zea mays GRMZM2G138967 N 0.809
Thhalv10022854m.g Eutrema salsugineum Thhalv10022854m.g I 0.807
Bo3g019610 Brassica oleracea Bo3g019610 I 0.807
Bra037221 Brassica rapa Bra037221 I 0.807
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.807
Bo7g010220 Brassica oleracea Bo7g010220 I 0.807
Bostr.18351s0307 Boechera stricta Bostr.18351s0307 I 0.807
Carubv10014541m.g Capsella rubella Carubv10014541m.g I 0.807
Bra039614 Brassica rapa Bra039614 I 0.807
GATA20 Arabidopsis lyrata Al_scaffold_0003_3815 I 0.807
Bra006851 Brassica rapa Bra006851 I 0.807
Bo9g026020 Brassica oleracea Bo9g026020 I 0.807
GATA20 Arabidopsis thaliana AT2G18380 D 0.807