CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDE_02029
(
Penicillium oxalicum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PDE_02029
T194657_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPS27088
GATA
432
467
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Penicillium oxalicum
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G052720
Zea mays
GRMZM2G052720
N
0.000
GRMZM2G175543
Zea mays
GRMZM2G175543
N
0.000
LPERR02G03850
Leersia perrieri
LPERR02G03850
N
0.000
LPERR06G21240
Leersia perrieri
LPERR06G21240
N
0.000
OBART02G04420
Oryza barthii
OBART02G04420
N
0.000
OGLUM02G04330
Oryza glumaepatula
OGLUM02G04330
N
0.000
ONIVA02G04420
Oryza nivara
ONIVA02G04420
N
0.000
ORGLA02G0040900
Oryza glaberrima
ORGLA02G0040900
N
0.000
Pavir.Db00303
Panicum virgatum
Pavir.Db00303
N
0.000