PDIP_61420 (Penicillium digitatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PDIP_61420 T194670_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN

NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.856 0.971
nit-2
M10601_2.00
Neurospora crassa
DHGATA

TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.856 0.971
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS

STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.833 0.629
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD

HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.833 0.629
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD

HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.833 0.629
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG

CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.833 0.629
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKV10222 GATA 673 707

Links

Other GATA family TFs
Other Penicillium digitatum TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.000
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.000
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.000
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.000
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.000
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.000
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.000
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.000
Cucsa.142990 Cucumis sativus Cucsa.142990 I 0.000
Cla004867 Citrullus lanatus Cla004867 I 0.000
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.000
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.000
Bra018854 Brassica rapa Bra018854 I 0.000
Bo6g024770 Brassica oleracea Bo6g024770 I 0.000
Bo6g022280 Brassica oleracea Bo6g022280 I 0.000
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.000