PGSC0003DMG400011765 (Solanum tuberosum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PGSC0003DMG400011765 T194709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN

NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.867 1.000
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY

RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.867 1.000
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN

NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.851 0.917
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN

NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.847 0.889
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR

YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.847 0.889
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN

NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.847 0.889
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN

NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.843 0.806
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH

DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.843 0.806
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN

NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.837 0.861
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG

CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.837 0.861
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB

VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.837 0.861
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN

NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.833 0.778
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN

NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.832 0.806
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.832 0.806
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN

NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.830 0.778
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA

TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.819 0.806
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH

DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.819 0.806
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH

DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.819 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400030708 GATA 173 208

Links

Other GATA family TFs
Other Solanum tuberosum TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL010226 Aedes aegypti AAEL010226 I 0.000
AALB001175 Anopheles albimanus AALB001175 I 0.000
AARA010786 Anopheles arabiensis AARA010786 I 0.000
AATE001337 Anopheles atroparvus AATE001337 I 0.000
ACEP22357 Atta cephalotes ACEP22357 I 0.000
ACOM039284 Anopheles coluzzii ACOM039284 I 0.000
ACUA015759 Anopheles culicifacies ACUA015759 I 0.000
ACYPI003796 Acyrthosiphon pisum ACYPI003796 I 0.000
ADAC004782 Anopheles darlingi ADAC004782 I 0.000
ADIR011358 Anopheles dirus ADIR011358 I 0.000
AEPI010093 Anopheles epiroticus AEPI010093 I 0.000
AFUN010901 Anopheles funestus AFUN010901 I 0.000
AGAP008814 Anopheles gambiae AGAP008814 I 0.000
AMAM016616 Anopheles maculatus AMAM016616 I 0.000
AMEC022127 Anopheles melas AMEC022127 I 0.000
AMEM007225 Anopheles merus AMEM007225 I 0.000
AMIN007190 Anopheles minimus AMIN007190 I 0.000
AQUA004188 Anopheles quadriannulatus AQUA004188 I 0.000
ASTEI05038 Anopheles stephensi ASTEI05038 I 0.000
BGIBMGA003285 Bombyx mori BGIBMGA003285 I 0.000
Cflo_06641--XP_394032.3_APIME Camponotus floridanus Cflo_06641--XP_394032.3_APIME I 0.000
CLEC011986 Cimex lectularius CLEC011986 I 0.000
CPIJ006828 Culex quinquefasciatus CPIJ006828 I 0.000
CpipJ_CPIJ006828 Culex pipiens CpipJ_CPIJ006828 I 0.000
DAPPUDRAFT_299735 Daphnia pulex DAPPUDRAFT_299735 I 0.000
da Drosophila melanogaster FBgn0000413 D 0.000
GA18660 Drosophila pseudoobscura FBgn0078660 I 0.000
GF15779 Drosophila ananassae FBgn0092803 I 0.000
GH13857 Drosophila grimshawi FBgn0121333 I 0.000
GI19105 Drosophila mojavensis FBgn0141844 I 0.000
GM18305 Drosophila sechellia FBgn0173212 I 0.000
GD23692 Drosophila simulans FBgn0195069 I 0.000
GJ15409 Drosophila virilis FBgn0202603 I 0.000
GK12476 Drosophila willistoni FBgn0214486 I 0.000
GE18936 Drosophila yakuba FBgn0236308 I 0.000
GB41727 Apis mellifera GB41727 I 0.000
Hsal_01424--XP_394032.3_APIME Harpegnathos saltator Hsal_01424--XP_394032.3_APIME I 0.000
KGM_13328 Danaus plexippus KGM_13328 I 0.000
L798_13597 Zootermopsis nevadensis L798_13597 I 0.000
LCUP014805 Lucilia cuprina LCUP014805 I 0.000
LCUP015675 Lucilia cuprina LCUP015675 I 0.000
LDEC016095 Leptinotarsa decemlineata LDEC016095 I 0.000
LLOJ002325 Lutzomyia longipalpis LLOJ002325 I 0.000
MDOA011656 Musca domestica MDOA011656 I 0.000
MESCA003205 Megaselia scalaris MESCA003205 I 0.000
NV16928 Nasonia vitripennis NV16928 I 0.000
PHUM374400 Pediculus humanus PHUM374400 I 0.000
SINV15659 Solenopsis invicta SINV15659 I 0.000
TC009743 Tribolium castaneum TC009743 I 0.000
YQE_12444 Dendroctonus ponderosae YQE_12444 I 0.000