CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400044001
(
Solanum tuberosum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PGSC0003DMG400044001
T194727_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400094430
GATA
67
97
VRETPLWRPGPTAKPVLCNACGIRWRTRGTL
Links
Other
GATA
family TFs
Other
Solanum tuberosum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G19681
Glycine max
GLYMA08G19681
N
0.819
AMTR_s00008p00092930
Amborella trichopoda
AMTR_s00008p00092930
I
0.811
SapurV1A.0201s0160
Salix purpurea
SapurV1A.0201s0160
I
0.806
LjSGA_060304.1
Lotus japonicus
LjSGA_060304.1
I
0.806
MDP0000129092
Malus domestica
MDP0000129092
I
0.806
evm.TU.supercontig_74.95
Carica papaya
evm.TU.supercontig_74.95
I
0.806
F775_19309
Aegilops tauschii
F775_19309
I
0.806
Bra017500
Brassica rapa
Bra017500
I
0.806