CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHUM220570
(
Pediculus humanus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PHUM220570
T194779_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gata1
M08127_2.00
Mus musculus
RNAGATAAGRV
BYCTTATCTNY
ChIP-seq
Mathelier et al.(2014)
MA0035.3
0.808
0.757
Gata1
M09124_2.00
Mus musculus
BKBNNNNNNVWGATAAVVV
BBBTTATCWBNNNNNNVMV
Misc
Kulakovskiy et al.(2013)
GATA1_MOUSE.H11MO.0.A
0.808
0.757
elt-1
M08206_2.00
Caenorhabditis elegans
GATWDNVATCT
AGATBNHWATC
ChIP-seq
Contrino et al.(2012)
Mw144
0.805
0.714
elt-1
M08207_2.00
Caenorhabditis elegans
TGATAASR
YSTTATCA
ChIP-seq
Contrino et al.(2012)
Mw145
0.805
0.714
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM220570-PA
GATA
647
681
CVNCATCRTPLWRRDDDGHYLCNACGLYNKVNGVN
PHUM220570-PA
GATA
719
753
CANCRTTNTTLWRRNNTGEPVCNACGLYFKLHGVP
Links
Other
GATA
family TFs
Other
Pediculus humanus
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy