POPTR_0003s08080 (Populus trichocarpa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 POPTR_0003s08080 T194875_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA26
M02001_2.00
Arabidopsis thaliana
NNKATBNNNN

NNNNVATMNN
PBM
Weirauch et al.(2014)
pTH7490
0.867 0.944
GATA27
M02005_2.00
Arabidopsis thaliana
NNGATBNNN

NNNVATCNN
PBM
Weirauch et al.(2014)
pTH7492
0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s08080.1 GATA 7 42
POPTR_0003s08080.2 GATA 7 42

Links

Other GATA family TFs
Other Populus trichocarpa TFs

Invalid Input OrderBy

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action