RHTO_02844 (Rhodosporidium toruloides)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 RHTO_02844 T195053_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gtaN
M02014_2.00 		Dictyostelium discoideum
NNMGATNNN
NNNATCKNN		 PBM
Weirauch et al.(2014)
pTH5355 		0.805 0.722
gtaI
M02012_2.00 		Dictyostelium discoideum
VMGATCKV
BMGATCKB		 PBM
Weirauch et al.(2014)
pTH5406 		0.803 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMS25117 GATA 371 406

Links

Other GATA family TFs
Other Rhodosporidium toruloides TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MVLG_03177 Microbotryum violaceum MVLG_03177 N 0.839
LALA0_S07e00188g Lachancea lanzarotensis LALA0_S07e00188g I 0.806
estExt_fgeneshDP_pg.C_5480001 Dictyostelium purpureum estExt_fgeneshDP_pg.C_5480001 I 0.805
gtaN Dictyostelium discoideum DDB_G0287057 D 0.805
EFA81457.1 Polysphondylium pallidum EFA81457.1 I 0.805
estExt_Genewise1Plus.C_1210006 Dictyostelium purpureum estExt_Genewise1Plus.C_1210006 I 0.803
gtaI Dictyostelium discoideum DDB_G0281661 D 0.803
M408DRAFT_61538 Serendipita vermifera M408DRAFT_61538 I 0.802