SELMODRAFT_29495 (Selaginella moellendorffii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 SELMODRAFT_29495 T195156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.802 0.923
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN

NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.802 0.885
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG

CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.802 0.885
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB

VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.802 0.885
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN

NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.802 0.846
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH

DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.802 0.846
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ28904 GATA 1 26

Links

Other GATA family TFs
Other Selaginella moellendorffii TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SELMODRAFT_29496 Selaginella moellendorffii SELMODRAFT_29496 I 0.867
SELMODRAFT_29502 Selaginella moellendorffii SELMODRAFT_29502 I 0.842
SELMODRAFT_29498 Selaginella moellendorffii SELMODRAFT_29498 I 0.842
gw1.241.61.1 Physcomitrella patens gw1.241.61.1 I 0.828
gw1.32.153.1 Physcomitrella patens gw1.32.153.1 I 0.828
gw1.32.154.1 Physcomitrella patens gw1.32.154.1 I 0.828
Traes_6DL_604AFCFEF Triticum aestivum Traes_6DL_604AFCFEF I 0.827
TRIUR3_22272 Triticum urartu TRIUR3_22272 I 0.827
Traes_6AL_47F6C4665 Triticum aestivum Traes_6AL_47F6C4665 I 0.827
GSMUA_Achr11G17140_001 Musa acuminata GSMUA_Achr11G17140_001 I 0.827
Lus10037994.g Linum usitatissimum Lus10037994.g I 0.816
MTR_4g071590 Medicago truncatula MTR_4g071590 I 0.816
MTR_4g471590 Medicago truncatula MTR_4g471590 I 0.816
Gorai.007G049700 Gossypium raimondii Gorai.007G049700 I 0.816
Lus10009227.g Linum usitatissimum Lus10009227.g I 0.816
GSMUA_Achr2G12730_001 Musa acuminata GSMUA_Achr2G12730_001 I 0.816
GSMUA_Achr5G19930_001 Musa acuminata GSMUA_Achr5G19930_001 I 0.816
GSMUA_Achr3G18320_001 Musa acuminata GSMUA_Achr3G18320_001 I 0.816
GSMUA_Achr4G24760_001 Musa acuminata GSMUA_Achr4G24760_001 I 0.816
PGSC0003DMG400003545 Solanum tuberosum PGSC0003DMG400003545 I 0.816
GSMUA_Achr4G29140_001 Musa acuminata GSMUA_Achr4G29140_001 I 0.816
GSMUA_Achr5G15220_001 Musa acuminata GSMUA_Achr5G15220_001 I 0.816
GSMUA_Achr5G13580_001 Musa acuminata GSMUA_Achr5G13580_001 I 0.816
GSMUA_Achr4G21390_001 Musa acuminata GSMUA_Achr4G21390_001 I 0.816
Ciclev10005658m.g Citrus clementina Ciclev10005658m.g I 0.816
Aquca_009_00534 Aquilegia coerulea Aquca_009_00534 I 0.816
TCM_000262 Theobroma cacao TCM_000262 I 0.816
Aquca_007_00342 Aquilegia coerulea Aquca_007_00342 I 0.816
mgf025806m Mimulus guttatus mgf025806m I 0.816
Pm017785 Prunus mume Pm017785 I 0.816
mgf006020m Mimulus guttatus mgf006020m I 0.816
Solyc02g084590.2 Solanum lycopersicum Solyc02g084590.2 I 0.816
SELMODRAFT_69567 Selaginella moellendorffii SELMODRAFT_69567 I 0.816
Eucgr.H00105 Eucalyptus grandis Eucgr.H00105 I 0.816
Eucgr.I02372 Eucalyptus grandis Eucgr.I02372 I 0.816
PRUPE_ppa014583m1g Prunus persica PRUPE_ppa014583m1g I 0.816
Cucsa.194390 Cucumis sativus Cucsa.194390 I 0.816
SELMODRAFT_69566 Selaginella moellendorffii SELMODRAFT_69566 I 0.816
orange1.1g024771m.g Citrus sinensis orange1.1g024771m.g I 0.816
Eucgr.J02392 Eucalyptus grandis Eucgr.J02392 I 0.816
Gorai.007G197900 Gossypium raimondii Gorai.007G197900 I 0.816
GLYMA07G14750 Glycine max GLYMA07G14750 I 0.816
Bo7g100740 Brassica oleracea Bo7g100740 I 0.816
Bo1g060480 Brassica oleracea Bo1g060480 I 0.816
LjSGA_052745.2 Lotus japonicus LjSGA_052745.2 I 0.816
GLYMA02G07850 Glycine max GLYMA02G07850 I 0.816
AMTR_s00004p00074220 Amborella trichopoda AMTR_s00004p00074220 I 0.816
GLYMA10G25480 Glycine max GLYMA10G25480 I 0.816
Bra038882 Brassica rapa Bra038882 I 0.816
Thhalv10025666m.g Eutrema salsugineum Thhalv10025666m.g I 0.816
Bra037173 Brassica rapa Bra037173 I 0.816
Bra012871 Brassica rapa Bra012871 I 0.816
OS02G0645600 Oryza sativa OS02G0645600 I 0.813
OS04G0539500 Oryza sativa OS04G0539500 I 0.813
ORGLA02G0221200 Oryza glaberrima ORGLA02G0221200 I 0.813
ONIVA04G18420 Oryza nivara ONIVA04G18420 I 0.813
OPUNC04G17860 Oryza punctata OPUNC04G17860 I 0.813
ORUFI02G27260 Oryza rufipogon ORUFI02G27260 I 0.813
ORUFI04G21800 Oryza rufipogon ORUFI04G21800 I 0.813
Traes_2AL_0EB34993E Triticum aestivum Traes_2AL_0EB34993E I 0.813
Sb06g023940 Sorghum bicolor Sb06g023940 I 0.813
BRADI3G50160 Brachypodium distachyon BRADI3G50160 I 0.813
Si010126m.g Setaria italica Si010126m.g I 0.813
Si017219m.g Setaria italica Si017219m.g I 0.813
Sb04g033450 Sorghum bicolor Sb04g033450 I 0.813
BRADI5G17057 Brachypodium distachyon BRADI5G17057 I 0.813
Traes_2BL_6899C8ABD Triticum aestivum Traes_2BL_6899C8ABD I 0.813
BGIOSGA016846 Oryza indica BGIOSGA016846 I 0.813
F775_20887 Aegilops tauschii F775_20887 I 0.813
GRMZM2G404973 Zea mays GRMZM2G404973 I 0.813
Traes_2DL_EEF2E71FA Triticum aestivum Traes_2DL_EEF2E71FA I 0.813
OPUNC02G23650 Oryza punctata OPUNC02G23650 I 0.813
Pavir.Ab02582 Panicum virgatum Pavir.Ab02582 I 0.813
GRMZM2G054615 Zea mays GRMZM2G054615 I 0.813
Pavir.Ga00679 Panicum virgatum Pavir.Ga00679 I 0.813
LPERR04G16350 Leersia perrieri LPERR04G16350 I 0.813
ONIVA02G28320 Oryza nivara ONIVA02G28320 I 0.813
Pavir.Gb01182 Panicum virgatum Pavir.Gb01182 I 0.813
GRMZM2G140669 Zea mays GRMZM2G140669 I 0.813
BGIOSGA008714 Oryza indica BGIOSGA008714 I 0.813
OGLUM04G20120 Oryza glumaepatula OGLUM04G20120 I 0.813
OGLUM02G26320 Oryza glumaepatula OGLUM02G26320 I 0.813
OMERI02G25330 Oryza meridionalis OMERI02G25330 I 0.813
OB04G27190 Oryza brachyantha OB04G27190 I 0.813
cassava37880.valid.m1 Manihot esculenta cassava37880.valid.m1 I 0.802
Cagra.0926s0073 Capsella grandiflora Cagra.0926s0073 I 0.802
Thhalv10002609m.g Eutrema salsugineum Thhalv10002609m.g I 0.802
cassava38225.valid.m1 Manihot esculenta cassava38225.valid.m1 I 0.802
Cagra.6467s0001 Capsella grandiflora Cagra.6467s0001 I 0.802
Carubv10014365m.g Capsella rubella Carubv10014365m.g I 0.802
Cagra.0026s0014 Capsella grandiflora Cagra.0026s0014 I 0.802
Cucsa.137630 Cucumis sativus Cucsa.137630 I 0.802
Cucsa.308400 Cucumis sativus Cucsa.308400 I 0.802
SapurV1A.2002s0020 Salix purpurea SapurV1A.2002s0020 I 0.802
Bostr.0568s0044 Boechera stricta Bostr.0568s0044 I 0.802
mgf010484m Mimulus guttatus mgf010484m I 0.802
mgf002151m Mimulus guttatus mgf002151m I 0.802
Thhalv10004566m.g Eutrema salsugineum Thhalv10004566m.g I 0.802
mgf020912m Mimulus guttatus mgf020912m I 0.802
PK01325.1 Cannabis sativa PK01325.1 I 0.802
Carubv10017445m.g Capsella rubella Carubv10017445m.g I 0.802
Aquca_030_00151 Aquilegia coerulea Aquca_030_00151 I 0.802
Aquca_034_00184 Aquilegia coerulea Aquca_034_00184 I 0.802
PK18657.1 Cannabis sativa PK18657.1 I 0.802
LjSGA_027909.1 Lotus japonicus LjSGA_027909.1 I 0.802
PK13647.1 Cannabis sativa PK13647.1 I 0.802
mgf000143m Mimulus guttatus mgf000143m I 0.802
mgf000977m Mimulus guttatus mgf000977m I 0.802
Bostr.19424s0211 Boechera stricta Bostr.19424s0211 I 0.802
SapurV1A.0680s0040 Salix purpurea SapurV1A.0680s0040 I 0.802
SapurV1A.0308s0200 Salix purpurea SapurV1A.0308s0200 I 0.802
Lus10023684.g Linum usitatissimum Lus10023684.g I 0.802
MDP0000137305 Malus domestica MDP0000137305 I 0.802
Lus10011762.g Linum usitatissimum Lus10011762.g I 0.802
Gorai.011G238800 Gossypium raimondii Gorai.011G238800 I 0.802
Gorai.007G287800 Gossypium raimondii Gorai.007G287800 I 0.802
Gorai.009G313700 Gossypium raimondii Gorai.009G313700 I 0.802
MDP0000224540 Malus domestica MDP0000224540 I 0.802
MDP0000248942 Malus domestica MDP0000248942 I 0.802
orange1.1g016706m.g Citrus sinensis orange1.1g016706m.g I 0.802
orange1.1g020996m.g Citrus sinensis orange1.1g020996m.g I 0.802
Pavir.Aa00151 Panicum virgatum Pavir.Aa00151 I 0.802
Pavir.Aa01215 Panicum virgatum Pavir.Aa01215 I 0.802
Pavir.Ab03246 Panicum virgatum Pavir.Ab03246 I 0.802
MDP0000528111 Malus domestica MDP0000528111 I 0.802
SapurV1A.0056s0470 Salix purpurea SapurV1A.0056s0470 I 0.802
cassava35682.valid.m1 Manihot esculenta cassava35682.valid.m1 I 0.802
SapurV1A.0518s0130 Salix purpurea SapurV1A.0518s0130 I 0.802
Eucgr.A02086 Eucalyptus grandis Eucgr.A02086 I 0.802
Eucgr.G01722 Eucalyptus grandis Eucgr.G01722 I 0.802
Eucgr.G02840 Eucalyptus grandis Eucgr.G02840 I 0.802
Ciclev10032018m.g Citrus clementina Ciclev10032018m.g I 0.802
Ciclev10021190m.g Citrus clementina Ciclev10021190m.g I 0.802
SapurV1A.1928s0030 Salix purpurea SapurV1A.1928s0030 I 0.802
SapurV1A.0802s0090 Salix purpurea SapurV1A.0802s0090 I 0.802
Eucgr.J01083 Eucalyptus grandis Eucgr.J01083 I 0.802
SapurV1A.0657s0040 Salix purpurea SapurV1A.0657s0040 I 0.802
gene20756-v1.0-hybrid Fragaria vesca gene20756-v1.0-hybrid I 0.802
gene23279-v1.0-hybrid Fragaria vesca gene23279-v1.0-hybrid I 0.802
Gorai.006G054800 Gossypium raimondii Gorai.006G054800 I 0.802
SapurV1A.0569s0120 Salix purpurea SapurV1A.0569s0120 I 0.802
evm.TU.supercontig_546.1 Carica papaya evm.TU.supercontig_546.1 I 0.802
evm.TU.contig_41047 Carica papaya evm.TU.contig_41047 I 0.802
evm.TU.supercontig_150.28 Carica papaya evm.TU.supercontig_150.28 I 0.802
Carubv10026725m.g Capsella rubella Carubv10026725m.g I 0.802
Solyc09g091250.2 Solanum lycopersicum Solyc09g091250.2 I 0.802
GSMUA_Achr6G26330_001 Musa acuminata GSMUA_Achr6G26330_001 I 0.802
GSMUA_Achr9G20700_001 Musa acuminata GSMUA_Achr9G20700_001 I 0.802
LPERR02G30140 Leersia perrieri LPERR02G30140 I 0.802
MLOC_56963 Hordeum vulgare MLOC_56963 I 0.802
GSMUA_Achr2G02830_001 Musa acuminata GSMUA_Achr2G02830_001 I 0.802
GSMUA_Achr1G08980_001 Musa acuminata GSMUA_Achr1G08980_001 I 0.802
GLYMA20G32050 Glycine max GLYMA20G32050 I 0.802
GRMZM2G163200 Zea mays GRMZM2G163200 I 0.802
GRMZM2G379005 Zea mays GRMZM2G379005 I 0.802
MTR_1g046680 Medicago truncatula MTR_1g046680 I 0.802
MTR_1g094930 Medicago truncatula MTR_1g094930 I 0.802
ONIVA02G38990 Oryza nivara ONIVA02G38990 I 0.802
OPUNC02G33710 Oryza punctata OPUNC02G33710 I 0.802
ORGLA02G0317800 Oryza glaberrima ORGLA02G0317800 I 0.802
OMERI02G34480 Oryza meridionalis OMERI02G34480 I 0.802
OGLUM02G37730 Oryza glumaepatula OGLUM02G37730 I 0.802
MTR_6g032830 Medicago truncatula MTR_6g032830 I 0.802
MTR_7g085410 Medicago truncatula MTR_7g085410 I 0.802
OB02G43220 Oryza brachyantha OB02G43220 I 0.802
GLYMA19G28650 Glycine max GLYMA19G28650 I 0.802
GLYMA16G27171 Glycine max GLYMA16G27171 I 0.802
Bo1g039780 Brassica oleracea Bo1g039780 I 0.802
Bo3g081950 Brassica oleracea Bo3g081950 I 0.802
Bo9g022010 Brassica oleracea Bo9g022010 I 0.802
Bra001925 Brassica rapa Bra001925 I 0.802
BGIOSGA009241 Oryza indica BGIOSGA009241 I 0.802
GATA5 Arabidopsis thaliana AT5G66320 I 0.802
AMTR_s00039p00112210 Amborella trichopoda AMTR_s00039p00112210 I 0.802
GATA1 Arabidopsis thaliana AT3G24050 D 0.802
GATA6 Arabidopsis thaliana AT3G51080 D 0.802
Bra013870 Brassica rapa Bra013870 I 0.802
BRADI3G54720 Brachypodium distachyon BRADI3G54720 I 0.802
GLYMA10G35470 Glycine max GLYMA10G35470 I 0.802
GLYMA16G04670 Glycine max GLYMA16G04670 I 0.802
GLYMA16G26870 Glycine max GLYMA16G26870 I 0.802
GLYMA02G08145 Glycine max GLYMA02G08145 I 0.802
GATA5 Arabidopsis lyrata fgenesh2_kg.8__2789__AT5G66320.1 I 0.802
F775_11212 Aegilops tauschii F775_11212 I 0.802
GATA6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001213 I 0.802
GATA1 Arabidopsis lyrata fgenesh2_kg.3__2631__AT3G24050.1 I 0.802
ORUFI02G38070 Oryza rufipogon ORUFI02G38070 I 0.802
PGSC0003DMG400003126 Solanum tuberosum PGSC0003DMG400003126 I 0.802
BME3-ZF Vitis vinifera VIT_13s0019g04390 I 0.802
Ca_08250 Cicer arietinum Ca_08250 I 0.802
Ca_08487 Cicer arietinum Ca_08487 I 0.802
Ca_16593 Cicer arietinum Ca_16593 I 0.802
VIT_08s0007g07550 Vitis vinifera VIT_08s0007g07550 I 0.802
GATA1 Vitis vinifera VIT_05s0051g00450 I 0.802
Traes_6AL_FD17E787A Triticum aestivum Traes_6AL_FD17E787A I 0.802
Traes_6DL_410C5CD3B Triticum aestivum Traes_6DL_410C5CD3B I 0.802
TRIUR3_08114 Triticum urartu TRIUR3_08114 I 0.802
Ca_27641 Cicer arietinum Ca_27641 I 0.802
Cla007764 Citrullus lanatus Cla007764 I 0.802
cassava22621.valid.m1 Manihot esculenta cassava22621.valid.m1 I 0.802
cassava22622.valid.m1 Manihot esculenta cassava22622.valid.m1 I 0.802
cassava22623.valid.m1 Manihot esculenta cassava22623.valid.m1 I 0.802
29904.m003012 Ricinus communis 29904.m003012 I 0.802
27494.m000044 Ricinus communis 27494.m000044 I 0.802
Cla013978 Citrullus lanatus Cla013978 I 0.802
Pm018532 Prunus mume Pm018532 I 0.802
Q76DY3_TOBAC Nicotiana tabacum Q76DY3_TOBAC D 0.802
TCM_043158 Theobroma cacao TCM_043158 I 0.802
TCM_026451 Theobroma cacao TCM_026451 I 0.802
POPTR_0005s11960 Populus trichocarpa POPTR_0005s11960 I 0.802
POPTR_0007s13700 Populus trichocarpa POPTR_0007s13700 I 0.802
POPTR_0008s03880 Populus trichocarpa POPTR_0008s03880 I 0.802
POPTR_0010s23010 Populus trichocarpa POPTR_0010s23010 I 0.802
POPTR_0003s17340 Populus trichocarpa POPTR_0003s17340 I 0.802
POPTR_0001s14130 Populus trichocarpa POPTR_0001s14130 I 0.802
PGSC0003DMG400011579 Solanum tuberosum PGSC0003DMG400011579 I 0.802
PGSC0003DMG400023341 Solanum tuberosum PGSC0003DMG400023341 I 0.802
PGSC0003DMG400027167 Solanum tuberosum PGSC0003DMG400027167 I 0.802
POPTR_0013s05610 Populus trichocarpa POPTR_0013s05610 I 0.802
POPTR_0019s04860 Populus trichocarpa POPTR_0019s04860 I 0.802
Solyc05g056120.2 Solanum lycopersicum Solyc05g056120.2 I 0.802
AMTR_s00001p00210810 Amborella trichopoda AMTR_s00001p00210810 I 0.802
TCM_020437 Theobroma cacao TCM_020437 I 0.802
Solyc05g053500.2 Solanum lycopersicum Solyc05g053500.2 I 0.802
Solyc01g110310.2 Solanum lycopersicum Solyc01g110310.2 I 0.802
PRUPE_ppa007936mg Prunus persica PRUPE_ppa007936mg I 0.802
Sb04g036520 Sorghum bicolor Sb04g036520 I 0.802
Si017317m.g Setaria italica Si017317m.g I 0.802
cassava24373.valid.m1 Manihot esculenta cassava24373.valid.m1 I 0.802