SELMODRAFT_442360 (Selaginella moellendorffii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 SELMODRAFT_442360 T195165_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA28
M01996_2.00
Arabidopsis thaliana
NNGATNN

NNATCNN
PBM
Weirauch et al.(2014)
pTH7505
0.812 0.750
GATA28
M06883_2.00
Arabidopsis thaliana
GATGATGATGATGATGATG

CATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
ZML2_col_a
0.812 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ25137 GATA 212 249

Links

Other GATA family TFs
Other Selaginella moellendorffii TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SELMODRAFT_409922 Selaginella moellendorffii SELMODRAFT_409922 I 0.867
gw1.68.123.1 Physcomitrella patens gw1.68.123.1 I 0.812
Aquca_007_00522 Aquilegia coerulea Aquca_007_00522 I 0.812
fgenesh2_pm.scaffold_111000001 Physcomitrella patens fgenesh2_pm.scaffold_111000001 I 0.812
e_gw1.226.30.1 Physcomitrella patens e_gw1.226.30.1 I 0.812
ZML2 Arabidopsis lyrata scaffold_104929.1 I 0.812
GATA28 Arabidopsis thaliana AT1G51600 D 0.812
fgenesh1_pm.scaffold_69000012 Physcomitrella patens fgenesh1_pm.scaffold_69000012 I 0.812