SKUD_204801 (Saccharomyces kudriavzevii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 SKUD_204801 T195243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRD1
M00047_2.00 		Saccharomyces cerevisiae
RGATCTMC
GKAGATCY		 PBM
Badis et al.(2008)
SRD1_2031 		0.867 0.944
SRD1
M01544_2.00 		Saccharomyces cerevisiae
NBAGWTYNN
NNRAWCTVN		 PBM
Zhu et al.(2009)
Srd1 		0.867 0.944
SRD1
M07476_2.00 		Saccharomyces cerevisiae
RGATCTVN
NBAGATCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0389.1 		0.867 0.944
SRD1
M08558_2.00 		Saccharomyces cerevisiae
RGATCTMN
NKAGATCY		 Misc
DeBoer et al.(2011)
YCR018C_530 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT43786 GATA 167 202

Links

Other GATA family TFs
Other Saccharomyces kudriavzevii TFs

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6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action