Traes_1AL_A1EA76E83 (Triticum aestivum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Traes_1AL_A1EA76E83 T195453_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA19
M06893_2.00
Arabidopsis thaliana
BNGATCBGATY

RATCVGATCNV
Dap-seq
OMalley et al.(2016)
GATA19_col_a
0.862 0.944
GATA19
M06894_2.00
Arabidopsis thaliana
HNGATCBGATY

RATCVGATCND
Dap-seq
OMalley et al.(2016)
GATA19_colamp_a
0.862 0.944
GATA20
M06884_2.00
Arabidopsis thaliana
GATCBGAT

ATCVGATC
Dap-seq
OMalley et al.(2016)
GATA20_col_a
0.820 0.889
GATA20
M06885_2.00
Arabidopsis thaliana
HNGATCNGATBND

HNVATCNGATCND
Dap-seq
OMalley et al.(2016)
GATA20_colamp_a
0.820 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1AL_A1EA76E83.2 GATA 112 147

Links

Other GATA family TFs
Other Triticum aestivum TFs

Invalid Input OrderBy

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action