CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_214458
(
Trichoderma virens
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
TRIVIDRAFT_214458
T195544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.867
1.000
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK16901
GATA
416
451
CHSCNRIDTPEWRRGPDGARTLCNACGLHYAKLERK
Links
Other
GATA
family TFs
Other
Trichoderma virens
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AATE012494
Anopheles atroparvus
AATE012494
N
0.000
ASIS023085
Anopheles sinensis
ASIS023085
N
0.000
BGLB002935
Biomphalaria glabrata
BGLB002935
N
0.000
CpipJ_CPIJ005175
Culex pipiens
CpipJ_CPIJ005175
N
0.000
CPIJ005175
Culex quinquefasciatus
CPIJ005175
N
0.000
SP4
Dasypus novemcinctus
ENSDNOG00000014491
N
0.000
ENSFALG00000001318
Ficedula albicollis
ENSFALG00000001318
N
0.000
GPUH_0002254301
Gongylonema pulchrum
GPUH_0002254301
N
0.000
ENSLACG00000008022
Latimeria chalumnae
ENSLACG00000008022
N
0.000
ENSMEUG00000002260
Macropus eugenii
ENSMEUG00000002260
N
0.000
SP1
Meleagris gallopavo
ENSMGAG00000007176
N
0.000
Myotis_brandtii_Sp6_10030434
Myotis brandtii
Myotis_brandtii_Sp6_10030434
N
0.000
scaffold114-EXSNAP2012.16
Pristionchus exspectatus
scaffold114-EXSNAP2012.16
N
0.000
Ppa-sptf-3
Pristionchus pacificus
PPA06467
N
0.000
SP4
Procavia capensis
ENSPCAG00000016506
N
0.000
ENSTNIG00000002389
Tetraodon nigroviridis
ENSTNIG00000002389
N
0.000
SP3
Vicugna pacos
ENSVPAG00000009658
N
0.000
WUBG_08742
Wuchereria bancrofti
WUBG_08742
N
0.000
ENSXMAG00000013916
Xiphophorus maculatus
ENSXMAG00000013916
N
0.000