egl-18 (Caenorhabditis elegans)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 WBGene00001186 T195699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN

NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.861 0.800
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN

NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.850 0.771
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F55A8.1a.1 GATA 266 300
F55A8.1a.2 GATA 266 300
F55A8.1b GATA 269 303

Links

Other GATA family TFs
Other Caenorhabditis elegans TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000752101 Angiostrongylus cantonensis ACAC_0000752101 I 0.850
ACOC_0000580401 Angiostrongylus costaricensis ACOC_0000580401 I 0.850
ALUE_0001545901 Ascaris lumbricoides ALUE_0001545901 I 0.850
ANCCAN_00554 Ancylostoma caninum ANCCAN_00554 I 0.850
ANCCEY_12899 Ancylostoma ceylanicum ANCCEY_12899 I 0.850
ASIM_0001333801 Anisakis simplex ASIM_0001333801 I 0.850
ASU_04064 Ascaris suum ASU_04064 I 0.850
Bm4254 Brugia malayi Bm4254 I 0.850
BXY_0772600 Bursaphelenchus xylophilus BXY_0772600 I 0.862
CBG13548 Caenorhabditis briggsae CBG13548 I 0.867
CBG13549 Caenorhabditis briggsae CBG13549 D 0.850
CBN10937 Caenorhabditis brenneri CBN10937 I 0.856
CJA11149 Caenorhabditis japonica CJA11149 I 0.850
CJA18864 Caenorhabditis japonica CJA18864 I 0.867
CRE31380 Caenorhabditis remanei CRE31380 I 0.850
CRE31381 Caenorhabditis remanei CRE31381 I 0.867
DICVIV_08848 Dictyocaulus viviparus DICVIV_08848 I 0.850
EVEC_0001284001 Enterobius vermicularis EVEC_0001284001 I 0.845
GPLIN_000855200 Globodera pallida GPLIN_000855200 I 0.850
Hba_15007 Heterorhabditis bacteriophora Hba_15007 I 0.850
HCOI01886300 Haemonchus contortus HCOI01886300 I 0.836
L596_g25881 Steinernema carpocapsae L596_g25881 I 0.836
L889_g31947 Steinernema feltiae L889_g31947 I 0.836
L892_g6412 Steinernema scapterisci L892_g6412 I 0.836
L893_g28710 Steinernema glaseri L893_g28710 I 0.836
L898_g8209 Steinernema monticolum L898_g8209 I 0.836
LOAG_07460 Loa loa LOAG_07460 I 0.850
maker-nMf.1.1.scaf08707-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf08707-augustus-gene-0.3 I 0.836
Minc08374 Meloidogyne incognita Minc08374 I 0.836
nAv.1.0.1.g03924 Acanthocheilonema viteae nAv.1.0.1.g03924 I 0.850
NBR_0001940901 Nippostrongylus brasiliensis NBR_0001940901 I 0.836
nDi.2.2.2.g02293 Dirofilaria immitis nDi.2.2.2.g02293 I 0.850
NECAME_05031 Necator americanus NECAME_05031 I 0.850
nLs.2.1.2.g04395 Litomosoides sigmodontis nLs.2.1.2.g04395 I 0.850
nOo.2.0.1.g08948 Onchocerca ochengi nOo.2.0.1.g08948 I 0.850
nRc.2.0.1.g15145 Romanomermis culicivorax nRc.2.0.1.g15145 I 0.851
OESDEN_09249 Oesophagostomum dentatum OESDEN_09249 I 0.850
OFLC_0000492601 Onchocerca flexuosa OFLC_0000492601 I 0.850
PTRK_0001379700 Parastrongyloides trichosuri PTRK_0001379700 I 0.851
RSKR_0000556500 Rhabditophanes kr3021 RSKR_0000556500 I 0.838
SBAD_0000818101 Soboliphyme baturini SBAD_0000818101 I 0.851
scaffold1024-EXSNAP2012.4 Pristionchus exspectatus scaffold1024-EXSNAP2012.4 I 0.850
scaffold1033-EXSNAP2012.2 Pristionchus exspectatus scaffold1033-EXSNAP2012.2 I 0.850
SMUV_0001093901 Syphacia muris SMUV_0001093901 I 0.847
SPAL_0001590300 Strongyloides papillosus SPAL_0001590300 I 0.851
SSTP_0001171300 Strongyloides stercoralis SSTP_0001171300 I 0.851
SVE_0995400 Strongyloides venezuelensis SVE_0995400 I 0.851
TCLT_0000574501 Thelazia callipaeda TCLT_0000574501 I 0.850
elt-6 Caenorhabditis elegans WBGene00001253 D 0.861
WBGene00241875 Onchocerca volvulus WBGene00241875 I 0.850
WUBG_10387 Wuchereria bancrofti WUBG_10387 I 0.850