CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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elt-3
(
Caenorhabditis elegans
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
WBGene00001251
T195703_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
elt-3
M08128_2.00
Caenorhabditis elegans
TGATAAVA
TBTTATCA
ChIP-seq
Mathelier et al.(2014)
MA0542.1
(Direct)
(Direct)
elt-3
M09557_2.00
Caenorhabditis elegans
DDTGATAASA
TSTTATCAHH
Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG07341
M01230_2.00
Caenorhabditis briggsae
HGATANNN
NNNTATCD
PBM
Lambert et al.(2019)
pTH11455
0.867
1.000
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
K02B9.4a
GATA
153
187
CSNCKTRETTLWRRNGEGGVECNACNLYFRKNNRK
K02B9.4b
GATA
244
278
CSNCKTRETTLWRRNGEGGVECNACNLYFRKNNRK
K02B9.4c
GATA
135
169
CSNCKTRETTLWRRNGEGGVECNACNLYFRKNNRK
K02B9.4d
GATA
96
130
CSNCKTRETTLWRRNGEGGVECNACNLYFRKNNRK
Links
Other
GATA
family TFs
Other
Caenorhabditis elegans
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy