CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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elt-6
(
Caenorhabditis elegans
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
WBGene00001253
T195705_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN
NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN
NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.851
0.943
For this family, TFs with SR scores >
0.802
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00666_2.00
GATA
51
85
CSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRTH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F52C12.5.1
GATA
265
299
CSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRTH
F52C12.5.2
GATA
265
299
CSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRTH
Links
Other
GATA
family TFs
Other
Caenorhabditis elegans
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy