end-1 (Caenorhabditis elegans)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 WBGene00001310 T195706_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription activator activity, RNA polymerase II-specific. Involved in endodermal cell fate specification and positive regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in E lineage cell. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
end-1
M00667_2.00		 Caenorhabditis elegans
NNHGATWNNN
NNNWATCDNN		 PBM
Narasimhan et al.(2015)
pTH9880		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00667_2.00 GATA 51 87

DNA Binding Domains

Protein ID Domain From To Sequence
F58E10.2 GATA 138 174

Links

Other GATA family TFs
Other Caenorhabditis elegans TFs

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3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action