ECM23 (Saccharomyces cerevisiae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 YPL021W T195745_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables sequence-specific DNA binding activity. Involved in pseudohyphal growth. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM23
M00054_2.00		 Saccharomyces cerevisiae
DAGATCYV
BRGATCTH		 PBM
Badis et al.(2008)
ECM23_2123		 (Direct) (Direct)
ECM23
M07483_2.00		 Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0293.1		 (Direct) (Direct)
ECM23
M08566_2.00		 Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 Misc
DeBoer et al.(2011)
YPL021W_578		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00054_2.00 GATA 51 86

DNA Binding Domains

Protein ID Domain From To Sequence
YPL021W GATA 132 167

Links

Other GATA family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action