Afo_R011198 (Aptenodytes forsteri)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Afo_R011198 T195817_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS

STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.822 0.647
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD

HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.822 0.647
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD

HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.822 0.647
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG

CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.822 0.647
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN

NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.808 0.588
nit-2
M10601_2.00
Neurospora crassa
DHGATA

TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.808 0.588
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R011198 GATA 896 929

Links

Other GATA family TFs
Other Aptenodytes forsteri TFs

Invalid Input OrderBy

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action