Cla014435 (Citrullus lanatus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cla014435 T195876_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA19
M06893_2.00
Arabidopsis thaliana
BNGATCBGATY

RATCVGATCNV
Dap-seq
OMalley et al.(2016)
GATA19_col_a
0.842 0.889
GATA19
M06894_2.00
Arabidopsis thaliana
HNGATCBGATY

RATCVGATCND
Dap-seq
OMalley et al.(2016)
GATA19_colamp_a
0.842 0.889
GATA20
M06884_2.00
Arabidopsis thaliana
GATCBGAT

ATCVGATC
Dap-seq
OMalley et al.(2016)
GATA20_col_a
0.812 0.861
GATA20
M06885_2.00
Arabidopsis thaliana
HNGATCNGATBND

HNVATCNGATCND
Dap-seq
OMalley et al.(2016)
GATA20_colamp_a
0.812 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla014435 GATA 120 155

Links

Other GATA family TFs
Other Citrullus lanatus TFs

Invalid Input OrderBy

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action