Cla015736 (Citrullus lanatus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cla015736 T195881_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA24
M01941_2.00
Arabidopsis thaliana
HGATBNN

NNVATCD
PBM
Weirauch et al.(2014)
pTH7661
0.861 0.889
OS06G0698900
M02015_2.00
Oryza sativa
NNNNAHBNN

NNVDTNNNN
PBM
Weirauch et al.(2014)
pTH8641
0.861 0.833
GATA28
M01996_2.00
Arabidopsis thaliana
NNGATNN

NNATCNN
PBM
Weirauch et al.(2014)
pTH7505
0.850 0.861
GATA28
M06883_2.00
Arabidopsis thaliana
GATGATGATGATGATGATG

CATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
ZML2_col_a
0.850 0.861
ZIM
M06892_2.00
Arabidopsis thaliana
AWYSRACGGYYVWGA

TCWBRRCCGTYSRWT
Dap-seq
OMalley et al.(2016)
ZIM_col_a
0.814 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla015736 GATA 231 268

Links

Other GATA family TFs
Other Citrullus lanatus TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_094570 Aspergillus clavatus CADACLAG00008883 I 0.000
estExt_genewise1_human.C_chr_5.10129 Pichia stipitis estExt_genewise1_human.C_chr_5.10129 I 0.000
PICST_72282 Scheffersomyces stipitis PICST_72282 I 0.000
PAS_chr3_0712 Komagataella pastoris PAS_chr3_0712 I 0.000
XP_002492941.1 Pichia pastoris XP_002492941.1 I 0.000
CTRG_03014 Candida tropicalis CTRG_03014 I 0.000
CD36_60230 Candida dubliniensis CD36_60230 I 0.000
CaO19.8778 Candida albicans CaO19.8778 I 0.000
CaO19.1187 Candida albicans CaO19.1187 I 0.000
CORT_0F04410 Candida orthopsilosis CORT_0F04410 N 0.000
GNLVRS01_PISO0D07923g Millerozyma farinosa GNLVRS01_PISO0D07923g N 0.000
LELG_04654 Lodderomyces elongisporus LELG_04654 N 0.000
GNLVRS01_PISO0C07856g Millerozyma farinosa GNLVRS01_PISO0C07856g N 0.000