Cucsa.069460 (Cucumis sativus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cucsa.069460 T196045_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG

CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.838 0.889
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN

NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.818 0.889
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS

SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.818 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.069460.1 GATA 29 64

Links

Other GATA family TFs
Other Cucumis sativus TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BHLH039 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001751 N 0.000
Bostr.20505s0056 Boechera stricta Bostr.20505s0056 N 0.000
Bostr.20505s0055 Boechera stricta Bostr.20505s0055 N 0.000
Bo01495s010 Brassica oleracea Bo01495s010 N 0.000
Bo4g112590 Brassica oleracea Bo4g112590 N 0.000
Bo6g072500 Brassica oleracea Bo6g072500 N 0.000
Bo6g072510 Brassica oleracea Bo6g072510 N 0.000
Bra014658 Brassica rapa Bra014658 N 0.000
Bra014657 Brassica rapa Bra014657 N 0.000
Bra014654 Brassica rapa Bra014654 N 0.000
Bra003260 Brassica rapa Bra003260 N 0.000
Cagra.0578s0028 Capsella grandiflora Cagra.0578s0028 N 0.000
Carubv10017770m.g Capsella rubella Carubv10017770m.g N 0.000
Thhalv10006189m.g Eutrema salsugineum Thhalv10006189m.g N 0.000
Thhalv10006191m.g Eutrema salsugineum Thhalv10006191m.g N 0.000