Cucsa.359570 (Cucumis sativus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cucsa.359570 T196065_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA24
M01941_2.00
Arabidopsis thaliana
HGATBNN

NNVATCD
PBM
Weirauch et al.(2014)
pTH7661
0.862 0.972
OS06G0698900
M02015_2.00
Oryza sativa
NNNNAHBNN

NNVDTNNNN
PBM
Weirauch et al.(2014)
pTH8641
0.862 0.889
GATA28
M01996_2.00
Arabidopsis thaliana
NNGATNN

NNATCNN
PBM
Weirauch et al.(2014)
pTH7505
0.851 0.889
GATA28
M06883_2.00
Arabidopsis thaliana
GATGATGATGATGATGATG

CATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
ZML2_col_a
0.851 0.889
ZIM
M06892_2.00
Arabidopsis thaliana
AWYSRACGGYYVWGA

TCWBRRCCGTYSRWT
Dap-seq
OMalley et al.(2016)
ZIM_col_a
0.815 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.359570.1 GATA 231 268
Cucsa.359570.2 GATA 231 268
Cucsa.359570.3 GATA 231 268
Cucsa.359570.4 GATA 231 268
Cucsa.359570.5 GATA 231 268
Cucsa.359570.6 GATA 222 259

Links

Other GATA family TFs
Other Cucumis sativus TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000007114 Ailuropoda melanoleuca ENSAMEG00000007114 I 0.000
Alligator_sinensis_CCG010361.1 Alligator sinensis Alligator_sinensis_CCG010361.1 I 0.000
ENSAPLG00000006681 Anas platyrhynchos ENSAPLG00000006681 I 0.000
ENSACAG00000003119 Anolis carolinensis ENSACAG00000003119 I 0.000
Afo_R014961 Aptenodytes forsteri Afo_R014961 I 0.000
ENSAMXG00000000331 Astyanax mexicanus ENSAMXG00000000331 I 0.000
ENSAMXG00000019111 Astyanax mexicanus ENSAMXG00000019111 I 0.000
ENSBTAP00000021593-D1 Bos grunniens ENSBTAP00000021593-D1 I 0.000
KLF9 Bos taurus ENSBTAG00000016229 I 0.000
KLF13 Callithrix jacchus ENSCJAG00000017617 I 0.000
KLF9 Callithrix jacchus ENSCJAG00000001575 I 0.000
Aan_R015091 Calypte anna Aan_R015091 I 0.000
ENSCPOG00000005302 Cavia porcellus ENSCPOG00000005302 I 0.000
Cmyd_10017062 Chelonia mydas Cmyd_10017062 I 0.000
ENSCSAG00000006853 Chlorocebus sabaeus ENSCSAG00000006853 I 0.000
ENSCSAG00000008358 Chlorocebus sabaeus ENSCSAG00000008358 I 0.000
klf13 Danio rerio ENSDARG00000061368 I 0.000
klf9 Danio rerio ENSDARG00000068194 I 0.000
KLF9 Dasypus novemcinctus ENSDNOG00000018839 I 0.000
KLF9 Equus caballus ENSECAG00000024925 I 0.000
ENSGMOG00000017987 Gadus morhua ENSGMOG00000017987 I 0.000
ENSGMOG00000017411 Gadus morhua ENSGMOG00000017411 I 0.000
ENSGMOG00000002059 Gadus morhua ENSGMOG00000002059 I 0.000
KLF9 Gallus gallus ENSGALG00000027374 I 0.000
ENSGALG00000026590 Gallus gallus ENSGALG00000026590 I 0.000
ENSGACG00000010739 Gasterosteus aculeatus ENSGACG00000010739 I 0.000
zgc:153115 Gasterosteus aculeatus ENSGACG00000016005 I 0.000
klf9 Gasterosteus aculeatus ENSGACG00000010668 I 0.000
Gfo_R008822 Geospiza fortis Gfo_R008822 I 0.000
KLF9 Gorilla gorilla ENSGGOG00000025900 I 0.000
KLF9 Homo sapiens ENSG00000119138 D 0.000
KLF13 Homo sapiens ENSG00000169926 D 0.000
ENSSTOG00000022758 Ictidomys tridecemlineatus ENSSTOG00000022758 I 0.000
ENSSTOG00000000238 Ictidomys tridecemlineatus ENSSTOG00000000238 I 0.000
ENSLACG00000018298 Latimeria chalumnae ENSLACG00000018298 I 0.000
ENSLACG00000004995 Latimeria chalumnae ENSLACG00000004995 I 0.000
ENSLOCG00000009508 Lepisosteus oculatus ENSLOCG00000009508 I 0.000
ENSLOCG00000014806 Lepisosteus oculatus ENSLOCG00000014806 I 0.000
ENSP00000366330 Macaca fascicularis ENSP00000366330 I 0.000
ENSMMUG00000000225 Macaca mulatta ENSMMUG00000000225 I 0.000
KLF13 Meleagris gallopavo ENSMGAG00000004699 I 0.000
KLF9 Microcebus murinus ENSMICG00000001056 I 0.000
KLF9 Monodelphis domestica ENSMODG00000002760 I 0.000
ENSMPUG00000009506 Mustela putorius furo ENSMPUG00000009506 I 0.000
Klf13 Mus musculus ENSMUSG00000052040 I 0.000
Klf9 Mus musculus ENSMUSG00000033863 D 0.000
Myotis_brandtii_KLF9_10034438 Myotis brandtii Myotis_brandtii_KLF9_10034438 I 0.000
KLF9 Myotis lucifugus ENSMLUG00000002809 I 0.000
NEMVEDRAFT_v1g39461 Nematostella vectensis NEMVEDRAFT_v1g39461 I 0.000
ENSNLEG00000000826 Nomascus leucogenys ENSNLEG00000000826 I 0.000
ENSNLEG00000007555 Nomascus leucogenys ENSNLEG00000007555 I 0.000
Ogr17781 Ophisaurus gracilis Ogr17781 I 0.000
Ogr16901 Ophisaurus gracilis Ogr16901 I 0.000
ENSONIG00000015310 Oreochromis niloticus ENSONIG00000015310 I 0.000
KLF9 Ornithorhynchus anatinus ENSOANG00000005024 I 0.000
ENSOANG00000010450 Ornithorhynchus anatinus ENSOANG00000010450 I 0.000
KLF9 Oryctolagus cuniculus ENSOCUG00000006343 I 0.000
ENSORLG00000010690 Oryzias latipes ENSORLG00000010690 I 0.000
zgc:153115 Oryzias latipes ENSORLG00000008372 I 0.000
klf13 Oryzias latipes ENSORLG00000007542 I 0.000
ENSOGAG00000026529 Otolemur garnettii ENSOGAG00000026529 I 0.000
KLF9 Otolemur garnettii ENSOGAG00000030356 I 0.000
ENSOARG00000012896 Ovis aries ENSOARG00000012896 I 0.000
ENSOARG00000016409 Ovis aries ENSOARG00000016409 I 0.000
KLF13 Pan troglodytes ENSPTRG00000006860 I 0.000
KLF9 Pan troglodytes ENSPTRG00000040619 I 0.000
ENSPANG00000025104 Papio anubis ENSPANG00000025104 I 0.000
ENSPSIG00000014849 Pelodiscus sinensis ENSPSIG00000014849 I 0.000
ENSPSIG00000009426 Pelodiscus sinensis ENSPSIG00000009426 I 0.000
ENSPFOG00000008405 Poecilia formosa ENSPFOG00000008405 I 0.000
ENSPFOG00000004556 Poecilia formosa ENSPFOG00000004556 I 0.000
Pvit_02178 Pogona vitticeps Pvit_02178 I 0.000
Pvit_17363 Pogona vitticeps Pvit_17363 I 0.000
ENSPPYG00000019284 Pongo abelii ENSPPYG00000019284 I 0.000
KLF13 Procavia capensis ENSPCAG00000009647 I 0.000
KLF9 Procavia capensis ENSPCAG00000003811 I 0.000
KLF9 Pteropus vampyrus ENSPVAG00000005970 I 0.000
Klf9 Rattus norvegicus ENSRNOG00000014215 I 0.000
ENSSHAG00000011337 Sarcophilus harrisii ENSSHAG00000011337 I 0.000
KLF9 Sus scrofa ENSSSCG00000021646 I 0.000
KLF13 Sus scrofa ENSSSCG00000026006 I 0.000
KLF13 Taeniopygia guttata ENSTGUG00000005470 I 0.000
ENSTRUG00000000453 Takifugu rubripes ENSTRUG00000000453 I 0.000
klf13 Takifugu rubripes ENSTRUG00000011759 I 0.000
zgc:153115 Takifugu rubripes ENSTRUG00000003801 I 0.000
ENSTSYG00000008257 Tarsius syrichta ENSTSYG00000008257 I 0.000
klf13 Tetraodon nigroviridis ENSTNIG00000008397 I 0.000
zgc:153115 Tetraodon nigroviridis ENSTNIG00000007828 I 0.000
TC000837 Tribolium castaneum TC000837 I 0.000
KLF9 Tupaia belangeri ENSTBEG00000007044 I 0.000
KLF9 Tursiops truncatus ENSTTRG00000001149 I 0.000
Tal_R011003 Tyto alba Tal_R011003 I 0.000
AAC59864 Xenopus laevis AAC59864 I 0.000
klf9.L Xenopus laevis XB-GENE-865026 I 0.000
klf13 Xenopus tropicalis XB-GENE-479837 I 0.000
klf9 Xenopus tropicalis XB-GENE-483889 I 0.000
ENSXMAG00000003301 Xiphophorus maculatus ENSXMAG00000003301 I 0.000
ENSXMAG00000001428 Xiphophorus maculatus ENSXMAG00000001428 I 0.000