CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_10224
(
Cochliobolus heterostrophus C5
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_fgenesh1_pm.C_10224
T196115_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_10224
GATA
285
320
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Cochliobolus heterostrophus C5
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy