estExt_fgenesh1_pm.C_sca_5_chr5_3_00060 (Nectria haematococca)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 estExt_fgenesh1_pm.C_sca_5_chr5_3_00060 T196117_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sub-1
M01235_2.00 		Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN		 PBM
Lambert et al.(2019)
pTH8614 		0.836 0.943
gtaG
M02007_2.00 		Dictyostelium discoideum
NDNBAGATBN
NVATCTVNHN		 PBM
Weirauch et al.(2014)
pTH5531 		0.805 0.657
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_sca_5_chr5_3_00060 GATA 408 442

Links

Other GATA family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action