gw1.32.154.1 (Physcomitrella patens)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 gw1.32.154.1 T196298_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN

NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.827 0.962
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN

NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.827 0.962
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR

YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.827 0.962
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN

NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.827 0.962
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN

NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.816 0.923
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY

RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.816 0.923
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN

NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.812 0.923
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.812 0.923
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN

NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.802 0.885
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.32.154.1 GATA 1 26

Links

Other GATA family TFs
Other Physcomitrella patens TFs

347 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCSAG00000010096 Chlorocebus sabaeus ENSCSAG00000010096 I 0.000
ENSP00000380079 Macaca fascicularis ENSP00000380079 I 0.000
ENSPANG00000009198 Papio anubis ENSPANG00000009198 I 0.000
ENSPPYG00000007036 Pongo abelii ENSPPYG00000007036 I 0.000
ENSSTOG00000013104 Ictidomys tridecemlineatus ENSSTOG00000013104 I 0.000
ZNF200 Pteropus vampyrus ENSPVAG00000001365 I 0.000
ZNF200 Pan troglodytes ENSPTRG00000007689 I 0.000
ZNF200 Procavia capensis ENSPCAG00000015754 I 0.000
ZNF200 Otolemur garnettii ENSOGAG00000028728 I 0.000
ZNF200 Macaca mulatta ENSMMUG00000017972 I 0.000
ZNF200 Gorilla gorilla ENSGGOG00000025449 I 0.000
ZNF200 Homo sapiens ENSG00000010539 D 0.000
ZNF200 Echinops telfairi ENSETEG00000008038 I 0.000
ZNF200 Equus caballus ENSECAG00000007791 I 0.000
ZNF200 Dasypus novemcinctus ENSDNOG00000042651 I 0.000
ZNF200 Callithrix jacchus ENSCJAG00000015577 I 0.000
ZNF200 Choloepus hoffmanni ENSCHOG00000006590 I 0.000