CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.21132s0007
(
Boechera stricta
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Bostr.21132s0007
T196393_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA14
M06889_2.00
Arabidopsis thaliana
NNNWNYAGATCTDNN
NNHAGATCTRNWNNN
Dap-seq
OMalley et al.(2016)
GATA14_col_a
0.867
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.21132s0007.1.p
GATA
131
166
CSHCGTRKSPLWREGPRGAGTLCNACGIRYRTGRLL
Links
Other
GATA
family TFs
Other
Boechera stricta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy