Ciclev10019614m.g (Citrus clementina)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Ciclev10019614m.g T196488_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA26
M02001_2.00
Arabidopsis thaliana
NNKATBNNNN

NNNNVATMNN
PBM
Weirauch et al.(2014)
pTH7490
0.867 0.972
GATA27
M02005_2.00
Arabidopsis thaliana
NNGATBNNN

NNNVATCNN
PBM
Weirauch et al.(2014)
pTH7492
0.867 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10019607m GATA 7 42
Ciclev10019614m GATA 7 42

Links

Other GATA family TFs
Other Citrus clementina TFs

Invalid Input OrderBy

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action