estExt_fgenesh2_pg.C_Chr_040222 (Micromonas sp RCC299)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 estExt_fgenesh2_pg.C_Chr_040222 T196504_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
0300010106
M02018_2.00
Ostreococcus tauri
NNNKATCN

NGATMNNN
PBM
Weirauch et al.(2014)
pTH7890
0.862 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
105435 GATA 107 142

Links

Other GATA family TFs
Other Micromonas sp RCC299 TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CHLREDRAFT_187360 Chlamydomonas reinhardtii CHLREDRAFT_187360 I 0.851
estExt_fgenesh1_pg.C_120215 Micromonas pusilla estExt_fgenesh1_pg.C_120215 I 0.862
OSTLU_30438 Ostreococcus lucimarinus OSTLU_30438 I 0.862
e_gw1.3.601.1 Ostreococcus RCC809 e_gw1.3.601.1 I 0.867
0300010106 Ostreococcus tauri 0300010106 D 0.862
fgenesh4_pg.C_scaffold_83000006 Volvox carteri fgenesh4_pg.C_scaffold_83000006 I 0.838
fgenesh4_pg.C_scaffold_83000014 Volvox carteri fgenesh4_pg.C_scaffold_83000014 I 0.838