Lus10020684.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10020684.g T196636_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10020684 GATA 24 65

Links

Other GATA family TFs
Other Linum usitatissimum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00147p00053080 Amborella trichopoda AMTR_s00147p00053080 N 0.848
Aquca_003_00608 Aquilegia coerulea Aquca_003_00608 N 0.807
GATA16 Arabidopsis lyrata scaffold_801309.1 I 0.812
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I 0.812
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I 0.823
Bo00847s050 Brassica oleracea Bo00847s050 I 0.812
Bra020650 Brassica rapa Bra020650 I 0.839
PK21934.1 Cannabis sativa PK21934.1 I 0.807
PK18820.1 Cannabis sativa PK18820.1 I 0.808
Carubv10027332m.g Capsella rubella Carubv10027332m.g I 0.812
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I 0.808
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I 0.812
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I 0.808
Ca_02992 Cicer arietinum Ca_02992 I 0.811
Cla005266 Citrullus lanatus Cla005266 N 0.823
Cla009422 Citrullus lanatus Cla009422 I 0.808
Cla022104 Citrullus lanatus Cla022104 I 0.812
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I 0.808
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I 0.807
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I 0.807
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I 0.808
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I 0.807
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I 0.807
Cucsa.252730 Cucumis sativus Cucsa.252730 I 0.812
Cucsa.069460 Cucumis sativus Cucsa.069460 I 0.808
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I 0.812
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I 0.808
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I 0.812
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I 0.812
GLYMA17G03410 Glycine max GLYMA17G03410 I 0.807
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.816
GLYMA07G37190 Glycine max GLYMA07G37190 I 0.807
Gorai.013G206400 Gossypium raimondii Gorai.013G206400 N 0.809
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I 0.807
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I 0.807
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I 0.808
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I 0.812
MLOC_54886 Hordeum vulgare MLOC_54886 I 0.823
LPERR04G11580 Leersia perrieri LPERR04G11580 I 0.823
Lus10016849.g Linum usitatissimum Lus10016849.g I 0.812
Lus10037721.g Linum usitatissimum Lus10037721.g I 0.812
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.853
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I 0.811
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I 0.812
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I 0.807
cassava15577.m1 Manihot esculenta cassava15577.m1 I 0.808
cassava15588.m1 Manihot esculenta cassava15588.m1 I 0.808
MTR_4g121110 Medicago truncatula MTR_4g121110 I 0.811
mgf003937m Mimulus guttatus mgf003937m I 0.812
mgf011737m Mimulus guttatus mgf011737m N 0.823
OBART01G45830 Oryza barthii OBART01G45830 I 0.823
OB01G55040 Oryza brachyantha OB01G55040 I 0.823
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I 0.823
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I 0.823
BGIOSGA000005 Oryza indica BGIOSGA000005 I 0.823
OLONG_011157 Oryza longistaminata OLONG_011157 I 0.823
ONIVA01G52080 Oryza nivara ONIVA01G52080 I 0.823
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I 0.823
OS01G0976800 Oryza sativa OS01G0976800 I 0.823
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I 0.823
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I 0.808
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I 0.811
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I 0.811
Pm008287 Prunus mume Pm008287 I 0.812
Pm003128 Prunus mume Pm003128 I 0.847
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I 0.847
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I 0.812
29889.m003248 Ricinus communis 29889.m003248 I 0.807
30128.m008883 Ricinus communis 30128.m008883 N 0.807
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I 0.808
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I 0.811
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I 0.811
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I 0.808
Si002983m.g Setaria italica Si002983m.g I 0.823
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I 0.808
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I 0.808
Sb03g047520 Sorghum bicolor Sb03g047520 I 0.823
TCM_004753 Theobroma cacao TCM_004753 I 0.820
TCM_026732 Theobroma cacao TCM_026732 I 0.808
TCM_021303 Theobroma cacao TCM_021303 I 0.812
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I 0.823
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I 0.823
TRIUR3_03165 Triticum urartu TRIUR3_03165 I 0.823
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I 0.834
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I 0.808