MDP0000129092 (Malus domestica)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 MDP0000129092 T196661_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA26
M02001_2.00
Arabidopsis thaliana
NNKATBNNNN

NNNNVATMNN
PBM
Weirauch et al.(2014)
pTH7490
0.816 0.833
GATA27
M02005_2.00
Arabidopsis thaliana
NNGATBNNN

NNNVATCNN
PBM
Weirauch et al.(2014)
pTH7492
0.816 0.767
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000129092 GATA 33 65

Links

Other GATA family TFs
Other Malus domestica TFs

Invalid Input OrderBy

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action