Pavir.Ea01306 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.Ea01306 T196737_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01306.1.p GATA 99 134

Links

Other GATA family TFs
Other Panicum virgatum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA01G0118700 Oryza glaberrima ORGLA01G0118700 N 0.867
OPUNC01G14080 Oryza punctata OPUNC01G14080 N 0.867
OGLUM01G16180 Oryza glumaepatula OGLUM01G16180 N 0.867
ORUFI01G16060 Oryza rufipogon ORUFI01G16060 N 0.867
OS01G0343300 Oryza sativa OS01G0343300 N 0.867
Pavir.Eb02364 Panicum virgatum Pavir.Eb02364 N 0.867
Si004417m.g Setaria italica Si004417m.g N 0.867
Sb03g013700 Sorghum bicolor Sb03g013700 N 0.867
OBART01G14380 Oryza barthii OBART01G14380 N 0.867
ONIVA04G04160 Oryza nivara ONIVA04G04160 N 0.867
GRMZM2G104390 Zea mays GRMZM2G104390 N 0.867
LPERR01G13070 Leersia perrieri LPERR01G13070 N 0.867
GRMZM2G052616 Zea mays GRMZM2G052616 N 0.867
OB01G24090 Oryza brachyantha OB01G24090 N 0.867
BRADI2G35057 Brachypodium distachyon BRADI2G35057 N 0.862
OLONG_020882 Oryza longistaminata OLONG_020882 N 0.853
BGIOSGA018779 Oryza indica BGIOSGA018779 N 0.853
OB05G13650 Oryza brachyantha OB05G13650 N 0.853
OS05G0155400 Oryza sativa OS05G0155400 N 0.853
OPUNC05G03600 Oryza punctata OPUNC05G03600 N 0.853
OBART05G03900 Oryza barthii OBART05G03900 N 0.853
ORGLA05G0036200 Oryza glaberrima ORGLA05G0036200 N 0.853
Pavir.J31164 Panicum virgatum Pavir.J31164 N 0.848
Si011269m.g Setaria italica Si011269m.g N 0.848
Sb09g004315 Sorghum bicolor Sb09g004315 N 0.848
AC194965.4_FG004 Zea mays AC194965.4_FG004 N 0.848
BRADI2G12590 Brachypodium distachyon BRADI2G12590 N 0.847
GATA23 Arabidopsis thaliana AT5G26930 N 0.808
Pavir.J34225 Panicum virgatum Pavir.J34225 N 0.450