CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J34225
(
Panicum virgatum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Pavir.J34225
T196775_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J34225.1.p
GATA
1
16
SLCNACGIRYRKKRRQ
Links
Other
GATA
family TFs
Other
Panicum virgatum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400023729
Solanum tuberosum
PGSC0003DMG400023729
I
0.000
Solyc10g080030.1
Solanum lycopersicum
Solyc10g080030.1
I
0.000
gene12119-v1.0-hybrid
Fragaria vesca
gene12119-v1.0-hybrid
I
0.000
gene30741-v1.0-hybrid
Fragaria vesca
gene30741-v1.0-hybrid
I
0.000
MDP0000135652
Malus domestica
MDP0000135652
I
0.000
MDP0000144516
Malus domestica
MDP0000144516
I
0.000
gene05564-v1.0-hybrid
Fragaria vesca
gene05564-v1.0-hybrid
N
0.000
gene25669-v1.0-hybrid
Fragaria vesca
gene25669-v1.0-hybrid
N
0.000