Thhalv10026300m.g (Eutrema salsugineum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Thhalv10026300m.g T196845_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG

CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.823 0.778
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN

NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.803 0.778
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS

SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.803 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10026300m GATA 39 74

Links

Other GATA family TFs
Other Eutrema salsugineum TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Mst35Ba Drosophila melanogaster FBgn0013300 N 0.000
Mst35Bb Drosophila melanogaster FBgn0013301 N 0.000
GA18970 Drosophila pseudoobscura FBgn0078969 N 0.000
GL14516 Drosophila persimilis FBgn0152121 N 0.000
GD21981 Drosophila simulans FBgn0193396 N 0.000
GK12423 Drosophila willistoni FBgn0214433 N 0.000