nit-2 (Neurospora crassa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 NCU09068 T196904_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nit-2
M02017_2.00		 Neurospora crassa
NNGATHNN
NNDATCNN		 PBM
Weirauch et al.(2014)
pTH8624		 (Direct) (Direct)
nit-2
M10601_2.00		 Neurospora crassa
DHGATA
TATCDH		 Transfac
Matys et al.(2006)
F$NIT2_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATAe
M03761_2.00 		Drosophila melanogaster
VHGATAAS
STTATCDB		 SELEX
Nitta et al.(2015)
GATAe_1 		0.822 0.600
GATAe
M03762_2.00 		Drosophila melanogaster
HGATAACNNNGTTATCD
HGATAACNNNGTTATCD		 SELEX
Nitta et al.(2015)
GATAe_2 		0.822 0.600
GATAe
M03763_2.00 		Drosophila melanogaster
HGATAAGNNNCTTATCD
HGATAAGNNNCTTATCD		 SELEX
Nitta et al.(2015)
GATAe_3 		0.822 0.600
GATAe
M06208_2.00 		Drosophila melanogaster
WGATAAG
CTTATCW		 B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391 		0.822 0.600
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02017_2.00 GATA 52 86

DNA Binding Domains

Protein ID Domain From To Sequence
NCU09068 GATA 743 777

Links

Other GATA family TFs
Other Neurospora crassa TFs

Invalid Input OrderBy

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action